RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
DDX1-204ENST00000459706 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
DDX1-204ENST00000459706 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
DDX1-204ENST00000459706 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
DDX1-204ENST00000459706 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
DDX1-204ENST00000459706 FOXD1Q16676 465 aa17.07■□□□□ 0.32
DDX1-204ENST00000459706 ADRA2BP18089 450 aa16.82■□□□□ 0.28
DDX1-204ENST00000459706 PPP6R1Q9UPN7 881 aa16.8■□□□□ 0.28
DDX1-204ENST00000459706 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
DDX1-204ENST00000459706 KCNA4P22459 653 aa16.17■□□□□ 0.18
DDX1-204ENST00000459706 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
DDX1-204ENST00000459706 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
DDX1-204ENST00000459706 MSH5O43196 834 aa15.68■□□□□ 0.1
DDX1-204ENST00000459706 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
DDX1-204ENST00000459706 EHMT2Q96KQ7 1210 aa15.62■□□□□ 0.09
DDX1-204ENST00000459706 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
DDX1-204ENST00000459706 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
DDX1-204ENST00000459706 NPM3O75607 178 aaKnown RBP15.47■□□□□ 0.07
DDX1-204ENST00000459706 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
DDX1-204ENST00000459706 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
DDX1-204ENST00000459706 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
DDX1-204ENST00000459706 POTEDQ86YR6 584 aa15.07■□□□□ 0
DDX1-204ENST00000459706 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
DDX1-204ENST00000459706 DMRT2Q9Y5R5 561 aa14.9□□□□□ -0.02
DDX1-204ENST00000459706 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
DDX1-204ENST00000459706 FOXD4L1Q9NU39 408 aa14.84□□□□□ -0.03
DDX1-204ENST00000459706 ZBTB22O15209 634 aa14.83□□□□□ -0.04
DDX1-204ENST00000459706 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
DDX1-204ENST00000459706 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
DDX1-204ENST00000459706 MYCNP04198 464 aaPredicted RBP14.38□□□□□ -0.11
DDX1-204ENST00000459706 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
DDX1-204ENST00000459706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.11□□□□□ -0.15
DDX1-204ENST00000459706 HNRNPUL2Q1KMD3 747 aaKnown RBP14.11□□□□□ -0.15
DDX1-204ENST00000459706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.154e-8■□□□□ 8.6
DDX1-204ENST00000459706 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
DDX1-204ENST00000459706 U3KPZ7 1027 aaPredicted RBP13.88□□□□□ -0.19
DDX1-204ENST00000459706 APLP2Q06481 763 aa13.86□□□□□ -0.19
DDX1-204ENST00000459706 FKBP8Q14318 412 aa13.77□□□□□ -0.21
DDX1-204ENST00000459706 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
DDX1-204ENST00000459706 AMER1Q5JTC6 1135 aaPredicted RBP13.66□□□□□ -0.22
DDX1-204ENST00000459706 ZNF219Q9P2Y4 722 aaPredicted RBP13.63□□□□□ -0.23
DDX1-204ENST00000459706 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
DDX1-204ENST00000459706 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
DDX1-204ENST00000459706 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
DDX1-204ENST00000459706 FBLN2P98095 1184 aa13.35□□□□□ -0.27
DDX1-204ENST00000459706 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
DDX1-204ENST00000459706 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
DDX1-204ENST00000459706 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
DDX1-204ENST00000459706 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
DDX1-204ENST00000459706 CAPN15O75808 1086 aa13.25□□□□□ -0.29
DDX1-204ENST00000459706 POLA2Q14181 598 aa13.25□□□□□ -0.29
DDX1-204ENST00000459706 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
DDX1-204ENST00000459706 ZBTB12Q9Y330 459 aaPredicted RBP13.24□□□□□ -0.29
DDX1-204ENST00000459706 PROM2Q8N271 834 aa13.21□□□□□ -0.29
DDX1-204ENST00000459706 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
DDX1-204ENST00000459706 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
DDX1-204ENST00000459706 ABCB7O75027 752 aa12.96□□□□□ -0.33
DDX1-204ENST00000459706 DSG3P32926 999 aa12.93□□□□□ -0.34
DDX1-204ENST00000459706 CACNB1Q02641 598 aaPredicted RBP12.92□□□□□ -0.34
DDX1-204ENST00000459706 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
DDX1-204ENST00000459706 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
DDX1-204ENST00000459706 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
DDX1-204ENST00000459706 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
DDX1-204ENST00000459706 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
DDX1-204ENST00000459706 IFNLR1Q8IU57 520 aaPredicted RBP12.82□□□□□ -0.36
DDX1-204ENST00000459706 NISCHQ9Y2I1 1504 aa12.79□□□□□ -0.36
DDX1-204ENST00000459706 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
DDX1-204ENST00000459706 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
DDX1-204ENST00000459706 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
DDX1-204ENST00000459706 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDX1-204ENST00000459706 KLHL34Q8N239 644 aa12.65□□□□□ -0.38
DDX1-204ENST00000459706 PKD2Q13563 968 aa12.61□□□□□ -0.39
DDX1-204ENST00000459706 PLCD3Q8N3E9 789 aa12.6□□□□□ -0.39
DDX1-204ENST00000459706 PLEKHG5O94827 1062 aa12.58□□□□□ -0.4
DDX1-204ENST00000459706 ZBTB47Q9UFB7 747 aaPredicted RBP12.57□□□□□ -0.4
DDX1-204ENST00000459706 PLCB2Q00722 1185 aa12.55□□□□□ -0.4
DDX1-204ENST00000459706 MIER1Q8N108 512 aa12.55□□□□□ -0.4
DDX1-204ENST00000459706 DCAF8L2P0C7V8 631 aa12.48□□□□□ -0.41
DDX1-204ENST00000459706 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
DDX1-204ENST00000459706 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
DDX1-204ENST00000459706 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
DDX1-204ENST00000459706 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
DDX1-204ENST00000459706 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
DDX1-204ENST00000459706 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.37□□□□□ -0.43
DDX1-204ENST00000459706 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
DDX1-204ENST00000459706 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
DDX1-204ENST00000459706 GSE1Q14687 1217 aa12.29□□□□□ -0.44
DDX1-204ENST00000459706 CIZ1Q9ULV3 898 aaPredicted RBP12.29□□□□□ -0.44
DDX1-204ENST00000459706 VSIG10Q8N0Z9 540 aa12.28□□□□□ -0.44
DDX1-204ENST00000459706 RGL2O15211 777 aa12.26□□□□□ -0.45
DDX1-204ENST00000459706 TAOK2Q9UL54 1235 aa12.21□□□□□ -0.45
DDX1-204ENST00000459706 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
DDX1-204ENST00000459706 NPM1P06748 294 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX1-204ENST00000459706 SPRYD3Q8NCJ5 442 aa12.17□□□□□ -0.46
DDX1-204ENST00000459706 NUBP1P53384 320 aa12.16□□□□□ -0.46
DDX1-204ENST00000459706 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
DDX1-204ENST00000459706 PAXIP1Q6ZW49 1069 aaPredicted RBP12.15□□□□□ -0.46
DDX1-204ENST00000459706 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
DDX1-204ENST00000459706 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
DDX1-204ENST00000459706 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms