RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 PCDHA12Q9UN75 941 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 WTIPA6NIX2 430 aaPredicted RBP17.91■□□□□ 0.46
LSS-205ENST00000457828 HARSP12081 509 aaKnown RBP17.91■□□□□ 0.46
LSS-205ENST00000457828 TMTC3Q6ZXV5 915 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 FAM160B2Q86V87 743 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 CLEC10AQ8IUN9 316 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 PAF1Q8N7H5 531 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 FAM184BQ9ULE4 1060 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 FOSP01100 380 aaPredicted RBP17.91■□□□□ 0.46
LSS-205ENST00000457828 PLCG1P19174 1290 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 DPYDQ12882 1025 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 FAM47CQ5HY64 1035 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 CABS1Q96KC9 395 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 KRT12Q99456 494 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 KCNK3O14649 394 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 FGFR2P21802 821 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 POLR2FP61218 127 aaKnown RBP17.91■□□□□ 0.46
LSS-205ENST00000457828 PDCLQ13371 301 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 NTRK3Q16288 839 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 ELP3Q9H9T3 547 aa17.91■□□□□ 0.46
LSS-205ENST00000457828 NWD1Q149M9 1564 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 DKC1O60832 514 aaKnown RBP eCLIP17.9■□□□□ 0.46
LSS-205ENST00000457828 FAM151AQ8WW52 585 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 LSM14BQ9BX40 385 aaKnown RBP17.9■□□□□ 0.46
LSS-205ENST00000457828 DNM3Q9UQ16 869 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 MON2Q7Z3U7 1717 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 A0A087WUV0 522 aaPredicted RBP17.9■□□□□ 0.46
LSS-205ENST00000457828 HEXIM1O94992 359 aaKnown RBP17.9■□□□□ 0.46
LSS-205ENST00000457828 FTCDO95954 541 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 RPS6KA1Q15418 735 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 ASIC2Q16515 512 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 KCND1Q9NSA2 647 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 PNMA3Q9UL41 463 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 ZNF142P52746 1687 aaPredicted RBP17.9■□□□□ 0.46
LSS-205ENST00000457828 ENTPD3O75355 529 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 MYZAPP0CAP1 466 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 ZNF18P17022 549 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 HMGCS2P54868 508 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 ERVK-24P63145 666 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 MUM1L1Q5H9M0 696 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 CCDC65Q8IXS2 484 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 NEDD1Q8NHV4 660 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 COG1Q8WTW3 980 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 DHTKD1Q96HY7 919 aaPredicted RBP17.9■□□□□ 0.46
LSS-205ENST00000457828 PCDHA4Q9UN74 947 aa17.9■□□□□ 0.46
LSS-205ENST00000457828 GPR75-ASB3A0A0A6YYF3 556 aa17.89■□□□□ 0.46
LSS-205ENST00000457828 CCNE1P24864 410 aa17.89■□□□□ 0.46
LSS-205ENST00000457828 KIF11P52732 1056 aa17.89■□□□□ 0.46
LSS-205ENST00000457828 GALNT17Q6IS24 598 aa17.89■□□□□ 0.46
LSS-205ENST00000457828 MIER3Q7Z3K6 550 aa17.89■□□□□ 0.46
LSS-205ENST00000457828 L1RE1Q9UN81 338 aa17.89■□□□□ 0.46
LSS-205ENST00000457828 GOLGA6L10A0A0M3HER8 536 aa17.89■□□□□ 0.45
LSS-205ENST00000457828 SSR1P43307 286 aaKnown RBP17.89■□□□□ 0.45
LSS-205ENST00000457828 EPHB4P54760 987 aa17.89■□□□□ 0.45
LSS-205ENST00000457828 TMEM110-MUSTN1A8MSY1 372 aa17.89■□□□□ 0.45
LSS-205ENST00000457828 CAMKK2Q96RR4 588 aa17.89■□□□□ 0.45
LSS-205ENST00000457828 ANKZF1Q9H8Y5 726 aa17.89■□□□□ 0.45
LSS-205ENST00000457828 AGPAT5Q9NUQ2 364 aa17.89■□□□□ 0.45
LSS-205ENST00000457828 BAZ2BQ9UIF8 2168 aaKnown RBP17.89■□□□□ 0.45
LSS-205ENST00000457828 HOXA13P31271 388 aaPredicted RBP17.89■□□□□ 0.45
LSS-205ENST00000457828 MCTP2Q6DN12 878 aa17.89■□□□□ 0.45
LSS-205ENST00000457828 CCDC170Q8IYT3 715 aa17.89■□□□□ 0.45
LSS-205ENST00000457828 ESYT3A0FGR9 886 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 GBP2P32456 591 aaPredicted RBP17.88■□□□□ 0.45
LSS-205ENST00000457828 NFIAQ12857 509 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 RETREG2Q8NC44 543 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 CTNNBL1Q8WYA6 563 aaPredicted RBP17.88■□□□□ 0.45
LSS-205ENST00000457828 THAP9Q9H5L6 903 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 PCDHA13Q9Y5I0 950 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 SLIT2O94813 1529 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 GSTTP1A0A1W2PQM5 241 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 ARHGAP25P42331 645 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 KRT71Q3SY84 523 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 DDX25Q9UHL0 483 aaKnown RBP17.88■□□□□ 0.45
LSS-205ENST00000457828 PPP1R3GB7ZBB8 358 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 CTNNA1P35221 906 aaKnown RBP17.88■□□□□ 0.45
LSS-205ENST00000457828 ATP2C1P98194 919 aaPredicted RBP17.88■□□□□ 0.45
LSS-205ENST00000457828 ARHGEF6Q15052 776 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 NFRKBQ6P4R8 1299 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 TADA2BQ86TJ2 420 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 PNMA8AQ86V59 439 aaPredicted RBP17.88■□□□□ 0.45
LSS-205ENST00000457828 CCDC25Q86WR0 208 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 EFCC1Q9HA90 598 aa17.88■□□□□ 0.45
LSS-205ENST00000457828 LIMA1Q9UHB6 759 aaKnown RBP17.88■□□□□ 0.45
LSS-205ENST00000457828 NCK2O43639 380 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 NNTQ13423 1086 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 ICE2Q659A1 982 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 NFU1Q9UMS0 254 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 FAM169AQ9Y6X4 670 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 A6NNZ2 444 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 CETN3O15182 167 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 UBE2SQ16763 222 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 TUBB8Q3ZCM7 444 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 HOXC10Q9NYD6 342 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 LRRIQ3A6PVS8 624 aaPredicted RBP17.87■□□□□ 0.45
LSS-205ENST00000457828 POTEJP0CG39 1038 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 NEFHP12036 1026 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 EIF2AK2P19525 551 aaKnown RBP17.87■□□□□ 0.45
LSS-205ENST00000457828 CYP4A11Q02928 519 aa17.87■□□□□ 0.45
LSS-205ENST00000457828 IFT88Q13099 833 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms