RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 WTAPQ15007 396 aa19.37■□□□□ 0.69
TVP23A-202ENST00000456096 PIBF1Q8WXW3 757 aa19.37■□□□□ 0.69
TVP23A-202ENST00000456096 C1QTNF1Q9BXJ1 281 aa19.37■□□□□ 0.69
TVP23A-202ENST00000456096 INSL6Q9Y581 213 aa19.37■□□□□ 0.69
TVP23A-202ENST00000456096 SIP14410 1827 aa19.37■□□□□ 0.69
TVP23A-202ENST00000456096 MICAL3Q7RTP6 2002 aa19.36■□□□□ 0.69
TVP23A-202ENST00000456096 E7EWF7 191 aa19.36■□□□□ 0.69
TVP23A-202ENST00000456096 TREHO43280 583 aa19.36■□□□□ 0.69
TVP23A-202ENST00000456096 AMHP03971 560 aa19.36■□□□□ 0.69
TVP23A-202ENST00000456096 HOXC8P31273 242 aa19.36■□□□□ 0.69
TVP23A-202ENST00000456096 MKRN4PQ13434 485 aaPredicted RBP19.36■□□□□ 0.69
TVP23A-202ENST00000456096 RALYLQ86SE5 291 aaKnown RBP19.36■□□□□ 0.69
TVP23A-202ENST00000456096 MYOCDQ8IZQ8 938 aa19.36■□□□□ 0.69
TVP23A-202ENST00000456096 RNPEPQ9H4A4 650 aa19.36■□□□□ 0.69
TVP23A-202ENST00000456096 RTEL1Q9NZ71 1219 aa19.36■□□□□ 0.69
TVP23A-202ENST00000456096 DOCK5Q9H7D0 1870 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 SPATA31C2B4DYI2 1134 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 NOP56O00567 594 aaKnown RBP19.35■□□□□ 0.69
TVP23A-202ENST00000456096 CHMLP26374 656 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 ICAM3P32942 547 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 SART3Q15020 963 aaKnown RBP19.35■□□□□ 0.69
TVP23A-202ENST00000456096 GNPTABQ3T906 1256 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 PLEKHG4Q58EX7 1191 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 CYFIP1Q7L576 1253 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 CATIPQ7Z7H3 387 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 NCOA7Q8NI08 942 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 RUFY2Q8WXA3 655 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 INPP4AQ96PE3 977 aaPredicted RBP19.35■□□□□ 0.69
TVP23A-202ENST00000456096 C17orf80Q9BSJ5 609 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 USP26Q9BXU7 913 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 EPHX3Q9H6B9 360 aa19.35■□□□□ 0.69
TVP23A-202ENST00000456096 FRMPD4Q14CM0 1322 aa19.34■□□□□ 0.69
TVP23A-202ENST00000456096 HTRA4P83105 476 aaPredicted RBP19.34■□□□□ 0.69
TVP23A-202ENST00000456096 SEMA3FQ13275 785 aa19.34■□□□□ 0.69
TVP23A-202ENST00000456096 NEDD9Q14511 834 aa19.34■□□□□ 0.69
TVP23A-202ENST00000456096 METTL7BQ6UX53 244 aa19.34■□□□□ 0.69
TVP23A-202ENST00000456096 GPR20Q99678 358 aa19.34■□□□□ 0.69
TVP23A-202ENST00000456096 OSBPL7Q9BZF2 842 aa19.34■□□□□ 0.69
TVP23A-202ENST00000456096 SETD4Q9NVD3 440 aa19.34■□□□□ 0.69
TVP23A-202ENST00000456096 TELO2Q9Y4R8 837 aa19.34■□□□□ 0.69
TVP23A-202ENST00000456096 STAM2O75886 525 aa19.33■□□□□ 0.68
TVP23A-202ENST00000456096 CTSHP09668 335 aa19.33■□□□□ 0.68
TVP23A-202ENST00000456096 ANTXR2P58335 489 aa19.33■□□□□ 0.68
TVP23A-202ENST00000456096 FBXO22Q8NEZ5 403 aa19.33■□□□□ 0.68
TVP23A-202ENST00000456096 IGDCC4Q8TDY8 1250 aa19.33■□□□□ 0.68
TVP23A-202ENST00000456096 FIBPO43427 364 aa19.32■□□□□ 0.68
TVP23A-202ENST00000456096 USP17L6PQ6QN14 398 aa19.32■□□□□ 0.68
TVP23A-202ENST00000456096 TRIM50Q86XT4 487 aa19.32■□□□□ 0.68
TVP23A-202ENST00000456096 SP7Q8TDD2 431 aaPredicted RBP19.32■□□□□ 0.68
TVP23A-202ENST00000456096 SEPT8Q92599 483 aa19.32■□□□□ 0.68
TVP23A-202ENST00000456096 UBE2ZQ9H832 354 aaPredicted RBP19.32■□□□□ 0.68
TVP23A-202ENST00000456096 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.31■□□□□ 0.68
TVP23A-202ENST00000456096 SGSM2O43147 1006 aa19.31■□□□□ 0.68
TVP23A-202ENST00000456096 CAND2O75155 1236 aa19.31■□□□□ 0.68
TVP23A-202ENST00000456096 UPP2O95045 317 aa19.31■□□□□ 0.68
TVP23A-202ENST00000456096 GNAT1P11488 350 aa19.31■□□□□ 0.68
TVP23A-202ENST00000456096 UTP14CQ5TAP6 766 aaKnown RBP19.31■□□□□ 0.68
TVP23A-202ENST00000456096 MB21D2Q8IYB1 491 aaPredicted RBP19.31■□□□□ 0.68
TVP23A-202ENST00000456096 SMARCC2Q8TAQ2 1214 aa19.31■□□□□ 0.68
TVP23A-202ENST00000456096 KHSRPQ92945 711 aaKnown RBP eCLIP19.31■□□□□ 0.68
TVP23A-202ENST00000456096 TOP1MTQ969P6 601 aa19.31■□□□□ 0.68
TVP23A-202ENST00000456096 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.3■□□□□ 0.68
TVP23A-202ENST00000456096 SP4Q02446 784 aa19.3■□□□□ 0.68
TVP23A-202ENST00000456096 EPC2Q52LR7 807 aa19.3■□□□□ 0.68
TVP23A-202ENST00000456096 PCNX4Q63HM2 1172 aa19.3■□□□□ 0.68
TVP23A-202ENST00000456096 MAP4K1Q92918 833 aa19.3■□□□□ 0.68
TVP23A-202ENST00000456096 RRP36Q96EU6 259 aaKnown RBP19.3■□□□□ 0.68
TVP23A-202ENST00000456096 LRFN3Q9BTN0 628 aa19.3■□□□□ 0.68
TVP23A-202ENST00000456096 MYL10Q9BUA6 226 aa19.3■□□□□ 0.68
TVP23A-202ENST00000456096 SPZ1Q9BXG8 430 aa19.3■□□□□ 0.68
TVP23A-202ENST00000456096 CD320Q9NPF0 282 aa19.3■□□□□ 0.68
TVP23A-202ENST00000456096 ZNF215Q9UL58 517 aaPredicted RBP19.3■□□□□ 0.68
TVP23A-202ENST00000456096 KAT6AQ92794 2004 aa19.3■□□□□ 0.68
TVP23A-202ENST00000456096 PIK3CDO00329 1044 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 MEIS2O14770 477 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 KCNA5P22460 613 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 ADAM17P78536 824 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 ARHGAP4P98171 946 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 XRRA1Q6P2D8 792 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 ZNF654Q8IZM8 581 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 CTCFLQ8NI51 663 aaPredicted RBP19.29■□□□□ 0.68
TVP23A-202ENST00000456096 CUL5Q93034 780 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 YME1L1Q96TA2 773 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 MAP3K14Q99558 947 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 SENP7Q9BQF6 1050 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 LY9Q9HBG7 655 aa19.29■□□□□ 0.68
TVP23A-202ENST00000456096 KIF5BP33176 963 aa19.28■□□□□ 0.68
TVP23A-202ENST00000456096 PLA2G5P39877 138 aa19.28■□□□□ 0.68
TVP23A-202ENST00000456096 LEXMQ3ZCV2 418 aa19.28■□□□□ 0.68
TVP23A-202ENST00000456096 NLRX1Q86UT6 975 aa19.28■□□□□ 0.68
TVP23A-202ENST00000456096 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.28■□□□□ 0.68
TVP23A-202ENST00000456096 LMBR1Q8WVP7 490 aa19.28■□□□□ 0.68
TVP23A-202ENST00000456096 MRPL38Q96DV4 380 aaKnown RBP19.28■□□□□ 0.68
TVP23A-202ENST00000456096 SAMD11Q96NU1 681 aa19.28■□□□□ 0.68
TVP23A-202ENST00000456096 SUPT16HQ9Y5B9 1047 aaKnown RBP19.28■□□□□ 0.68
TVP23A-202ENST00000456096 DDAH1O94760 285 aa19.27■□□□□ 0.68
TVP23A-202ENST00000456096 SMARCA1P28370 1054 aa19.27■□□□□ 0.68
TVP23A-202ENST00000456096 GPM6BQ13491 265 aa19.27■□□□□ 0.68
TVP23A-202ENST00000456096 PTPROQ16827 1216 aa19.27■□□□□ 0.68
TVP23A-202ENST00000456096 FAM26DQ5JW98 314 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms