RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 WDR5P61964 334 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 TOB2Q14106 344 aaPredicted RBP15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 IKBKEQ14164 716 aa15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 SKIV2LQ15477 1246 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 MLXIPQ9HAP2 919 aa15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 LY9Q9HBG7 655 aa15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 LMCD1Q9NZU5 365 aa15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 TCF20Q9UGU0 1960 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 MUC3AQ02505 3323 aa15.83■□□□□ 0.12
PDLIM2-213ENST00000448520 NBNO60934 754 aa15.82■□□□□ 0.12
PDLIM2-213ENST00000448520 STAM2O75886 525 aa15.82■□□□□ 0.12
PDLIM2-213ENST00000448520 GGPS1O95749 300 aa15.82■□□□□ 0.12
PDLIM2-213ENST00000448520 HOXA13P31271 388 aaPredicted RBP15.82■□□□□ 0.12
PDLIM2-213ENST00000448520 WTAPQ15007 396 aa15.82■□□□□ 0.12
PDLIM2-213ENST00000448520 HSDL1Q3SXM5 330 aa15.82■□□□□ 0.12
PDLIM2-213ENST00000448520 HOMER1Q86YM7 354 aa15.82■□□□□ 0.12
PDLIM2-213ENST00000448520 BRF1Q92994 677 aa15.82■□□□□ 0.12
PDLIM2-213ENST00000448520 RAD9AQ99638 391 aa15.82■□□□□ 0.12
PDLIM2-213ENST00000448520 EPOPA6NHQ4 379 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 GJB5O95377 273 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 ZNF286BP0CG31 522 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 FGD1P98174 961 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 SP2Q02086 613 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 APOBRQ0VD83 1088 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 TROAPQ12815 778 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 TRIM71Q2Q1W2 868 aaKnown RBP15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 GNPTABQ3T906 1256 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 ZNF618Q5T7W0 954 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 EMSYQ7Z589 1322 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 CATIPQ7Z7H3 387 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 FCHSD1Q86WN1 690 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 TMEM87BQ96K49 555 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 PIGSQ96S52 555 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 MAP3K14Q99558 947 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 MYL10Q9BUA6 226 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 BRPF3Q9ULD4 1205 aa15.81■□□□□ 0.12
PDLIM2-213ENST00000448520 H3BRB1 525 aa15.8■□□□□ 0.12
PDLIM2-213ENST00000448520 CYTH3O43739 400 aa15.8■□□□□ 0.12
PDLIM2-213ENST00000448520 RXRAP19793 462 aa15.8■□□□□ 0.12
PDLIM2-213ENST00000448520 ICAM3P32942 547 aa15.8■□□□□ 0.12
PDLIM2-213ENST00000448520 GRB10Q13322 594 aa15.8■□□□□ 0.12
PDLIM2-213ENST00000448520 NEDD9Q14511 834 aa15.8■□□□□ 0.12
PDLIM2-213ENST00000448520 C16orf70Q9BSU1 422 aa15.8■□□□□ 0.12
PDLIM2-213ENST00000448520 TUT1Q9H6E5 874 aaKnown RBP15.8■□□□□ 0.12
PDLIM2-213ENST00000448520 KAT6AQ92794 2004 aa15.8■□□□□ 0.12
PDLIM2-213ENST00000448520 TRANK1O15050 2925 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 C17orf102A2RUQ5 167 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 RSPH10B2B2RC85 870 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 LGR5O75473 907 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 ARHGEF15O94989 841 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 LARGE1O95461 756 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 RSPH10BP0C881 870 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 GNAT1P11488 350 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 UBA1P22314 1058 aaKnown RBP15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 SMARCA1P28370 1054 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 DEFB103AP81534 67 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 ZNF200P98182 395 aaPredicted RBP15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 SLC35G1Q2M3R5 365 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 TRAF7Q6Q0C0 670 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 NFXL1Q6ZNB6 911 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 SERINC5Q86VE9 423 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 IL31RAQ8NI17 732 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 HLA-CQ95604 372 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 TGS1Q96RS0 853 aaKnown RBP15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 MTA3Q9BTC8 594 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 AGXT2Q9BYV1 514 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 TPCN1Q9ULQ1 816 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 NAP1L2Q9ULW6 460 aaPredicted RBP15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 INSL6Q9Y581 213 aa15.79■□□□□ 0.12
PDLIM2-213ENST00000448520 BRWD1Q9NSI6 2320 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 KLF18A0A0U1RQI7 1052 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 NOP56O00567 594 aaKnown RBP15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 LPXNO60711 386 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 DTNBO60941 627 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 CAND2O75155 1236 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 THPOP40225 353 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 ERVK-21P61565 698 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 TFF2Q03403 129 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 XRRA1Q6P2D8 792 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 TMTC2Q8N394 836 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 ATP6V0A1Q93050 837 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 INPP4AQ96PE3 977 aaPredicted RBP15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 LZTS2Q9BRK4 669 aa15.78■□□□□ 0.12
PDLIM2-213ENST00000448520 PTPRSQ13332 1948 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 LCHNA4D1U4 455 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 CCDC69A6NI79 296 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 SPATA31C2B4DYI2 1134 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 FIBPO43427 364 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 COL9A1P20849 921 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 KIF5BP33176 963 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 LIFRP42702 1097 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 GNAQP50148 359 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 KRT40Q6A162 431 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 METTL7BQ6UX53 244 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 ZNF654Q8IZM8 581 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 CUL5Q93034 780 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 WNT8BQ93098 351 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 SENP7Q9BQF6 1050 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 SPZ1Q9BXG8 430 aa15.77■□□□□ 0.12
PDLIM2-213ENST00000448520 RNPEPQ9H4A4 650 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms