RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SGK1O00141 431 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 DDX39AO00148 427 aaKnown RBP20.13■□□□□ 0.81
SHANK3-203ENST00000445220 GYG1P46976 350 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 BCAMP50895 628 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 TAB3Q8N5C8 712 aaPredicted RBP20.13■□□□□ 0.81
SHANK3-203ENST00000445220 KCNV2Q8TDN2 545 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 AK8Q96MA6 479 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 BCS1LQ9Y276 419 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 GJA3Q9Y6H8 435 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 AOC3Q16853 763 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 TRIM11Q96F44 468 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 TRAIPQ9BWF2 469 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 ANKARQ7Z5J8 1434 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 ROBO2Q9HCK4 1378 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 LARGE1O95461 756 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 FMNL1O95466 1100 aaPredicted RBP20.13■□□□□ 0.81
SHANK3-203ENST00000445220 CCNE1P24864 410 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 POLR2BP30876 1174 aaKnown RBP20.13■□□□□ 0.81
SHANK3-203ENST00000445220 GTF2IP78347 998 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 SPARCL1Q14515 664 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 OTUD6AQ7L8S5 288 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 FAM178BQ8IXR5 827 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 AP1M1Q9BXS5 423 aa20.13■□□□□ 0.81
SHANK3-203ENST00000445220 HECW2Q9P2P5 1572 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 AFPP02771 609 aaKnown RBP20.12■□□□□ 0.81
SHANK3-203ENST00000445220 KRT31Q15323 416 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 BRDTQ58F21 947 aaPredicted RBP20.12■□□□□ 0.81
SHANK3-203ENST00000445220 COG1Q8WTW3 980 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 PNMA2Q9UL42 364 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 TTLL3Q9Y4R7 772 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 CFBP00751 764 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 APOA5Q6Q788 366 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 SLFN12Q8IYM2 578 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 CPSF1Q10570 1443 aaKnown RBP20.12■□□□□ 0.81
SHANK3-203ENST00000445220 KDM4FA0A1W2PPD8 638 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 MYCLP12524 364 aaPredicted RBP20.12■□□□□ 0.81
SHANK3-203ENST00000445220 USP14P54578 494 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 MB21D1Q8N884 522 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 PROCA1Q8NCQ7 364 aaPredicted RBP20.12■□□□□ 0.81
SHANK3-203ENST00000445220 RNF26Q9BY78 433 aaPredicted RBP20.12■□□□□ 0.81
SHANK3-203ENST00000445220 ST7Q9NRC1 585 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 KRT19P08727 400 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 NR2F2P24468 414 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 PCYT1AP49585 367 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 BPIFB4P59827 614 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 CUL4BQ13620 913 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 FAM133AQ8N9E0 248 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 ZC4H2Q9NQZ6 224 aa20.12■□□□□ 0.81
SHANK3-203ENST00000445220 MAGOHP61326 146 aaKnown RBP20.11■□□□□ 0.81
SHANK3-203ENST00000445220 PROSER3Q2NL68 480 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 TRIM55Q9BYV6 548 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 GREM2Q9H772 168 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 P4HA1P13674 534 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 LARP4BQ92615 738 aaKnown RBP20.11■□□□□ 0.81
SHANK3-203ENST00000445220 ATP6V1G3Q96LB4 118 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 ORC6Q9Y5N6 252 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 LOC102724428A0A0B4J2F2 783 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 ARHGAP10A1A4S6 786 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 SIK1P57059 783 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 MYL7Q01449 175 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 ATG16L1Q676U5 607 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 CCDC117Q8IWD4 279 aaPredicted RBP20.11■□□□□ 0.81
SHANK3-203ENST00000445220 NIM1KQ8IY84 436 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 ZNF653Q96CK0 615 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 STK17AQ9UEE5 414 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 H7C0C1 242 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 GAS7O60861 476 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 ATP5OP48047 213 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 USH1GQ495M9 461 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 SCYL2Q6P3W7 929 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 LCA5Q86VQ0 697 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 TRIM50Q86XT4 487 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 CCDC24Q8N4L8 307 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 EPC1Q9H2F5 836 aa20.11■□□□□ 0.81
SHANK3-203ENST00000445220 MAPK4P31152 587 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 RWDD2BP57060 319 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 HDLBPQ00341 1268 aaKnown RBP20.1■□□□□ 0.81
SHANK3-203ENST00000445220 TCP10Q12799 353 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 ZYXQ15942 572 aaKnown RBP20.1■□□□□ 0.81
SHANK3-203ENST00000445220 RINT1Q6NUQ1 792 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 STAMBPL1Q96FJ0 436 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 MIS12Q9H081 205 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 PODXLO00592 558 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 HOXA7P31268 230 aaPredicted RBP20.1■□□□□ 0.81
SHANK3-203ENST00000445220 MFAP3P55082 362 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 TNFAIP1Q13829 316 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 C16orf87Q6PH81 154 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 SDR42E1Q8WUS8 393 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 MAML1Q92585 1016 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 SRPRBQ9Y5M8 271 aaKnown RBP20.1■□□□□ 0.81
SHANK3-203ENST00000445220 NOP56O00567 594 aaKnown RBP20.1■□□□□ 0.81
SHANK3-203ENST00000445220 SRGAP2O75044 1071 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 PRPF6O94906 941 aaKnown RBP20.1■□□□□ 0.81
SHANK3-203ENST00000445220 PTK2Q05397 1052 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 GJA10Q969M2 543 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 CHMP6Q96FZ7 201 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 KLRF2D3W0D1 207 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 PHKA1P46020 1223 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 RAD23BP54727 409 aa20.1■□□□□ 0.81
SHANK3-203ENST00000445220 OCA2Q04671 838 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms