RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 MYOTQ9UBF9 498 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 ASH2LQ9UBL3 628 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 CBLCQ9ULV8 474 aa5.35□□□□□ -1.55
LSM1P1-201ENST00000438629 TEX51A0A1B0GUA7 166 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 SLC12A8A0AV02 714 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 M0R2C6 588 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 CBX4O00257 560 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 NKRFO15226 690 aaKnown RBP eCLIP5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 GAS7O60861 476 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 SEMA7AO75326 666 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 GLRX3O76003 335 aaKnown RBP5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 NCAM1P13591 858 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 KRT15P19012 456 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 EPHA5P54756 1037 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 JAM2P57087 298 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 OCRLQ01968 901 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 FIGNQ5HY92 759 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 ABHD17CQ6PCB6 329 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 HHIPL2Q6UWX4 724 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 PRR23BQ6ZRT6 265 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 KCTD1Q719H9 257 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 TMC6Q7Z403 805 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 THNSL2Q86YJ6 484 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 OR2W6PQ8NHA6 318 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 SCYL1Q96KG9 808 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 BRINP2Q9C0B6 783 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 MTFR1LQ9H019 292 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 RNF38Q9H0F5 515 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 B4GALT6Q9UBX8 382 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 SRPK3Q9UPE1 567 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 SIT1Q9Y3P8 196 aa5.34□□□□□ -1.55
LSM1P1-201ENST00000438629 TCRBV5S2A0A599 114 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 SLC27A2O14975 620 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 PAX4O43316 350 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 KPNA6O60684 536 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 CLASP2O75122 1294 aaKnown RBP5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 HIP1RO75146 1068 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 F2P00734 622 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 AMY2AP04746 511 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 PFKLP17858 780 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 AMY2BP19961 511 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 CNGA1P29973 690 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 MECP2P51608 486 aaKnown RBP5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 TUSC3Q13454 348 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 DHCR24Q15392 516 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 OTOP1Q7RTM1 612 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 ZC3H18Q86VM9 953 aaKnown RBP5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 AMIGO3Q86WK7 504 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 CISD2Q8N5K1 135 aaKnown RBP5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 TTLL11Q8NHH1 800 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 LEO1Q8WVC0 666 aaPredicted RBP5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 CPA5Q8WXQ8 436 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 KCNN1Q92952 543 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 DDX11Q96FC9 970 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 BOCQ9BWV1 1114 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 RXFP1Q9HBX9 757 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 ATP23Q9Y6H3 246 aa5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
LSM1P1-201ENST00000438629 IRS2Q9Y4H2 1338 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 TCRBV5S4A2TA0A5A2 114 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 PTPDC1A2A3K4 754 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 TRAF5O00463 557 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 PCBP1Q15365 356 aaKnown RBP eCLIP5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 ZNF174Q15697 407 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 BTBD8Q5XKL5 378 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 ETV3LQ6ZN32 361 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 RNF180Q86T96 592 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 LDHDQ86WU2 507 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 PTRH1Q86Y79 214 aaKnown RBP5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 MIB1Q86YT6 1006 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 PASD1Q8IV76 773 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 FAM126BQ8IXS8 530 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 TOE1Q96GM8 510 aaKnown RBP5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 FAM84AQ96KN4 292 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 SMURF1Q9HCE7 757 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 HSPBP1Q9NZL4 362 aa5.32□□□□□ -1.56
LSM1P1-201ENST00000438629 H7C1D1 291 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 MAN2B1O00754 1011 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 ZEB2O60315 1214 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 FARP2O94887 1054 aaPredicted RBP5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 TMEM253P0C7T8 217 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 NKX3-2P78367 333 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 ZNF200P98182 395 aaPredicted RBP5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 CACNB2Q08289 660 aaPredicted RBP5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 PTPROQ16827 1216 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 PKN3Q6P5Z2 889 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 SH3RF2Q8TEC5 729 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 CLEC4DQ8WXI8 215 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 USP7Q93009 1102 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 SLC38A3Q99624 504 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 MCOLN1Q9GZU1 580 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 ACSS2Q9NR19 701 aa5.31□□□□□ -1.56
LSM1P1-201ENST00000438629 MYOCOSA0A1B0GUC4 107 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 FAM83GA6ND36 823 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 N4BP3O15049 544 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 BRINP1O60477 761 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 CYP17A1P05093 508 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms