RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 RBAK-RBAKDNI3L0D1 243 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 FIBPO43427 364 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 SMIM10L2AP0DMW4 78 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 SMIM10L2BP0DMW5 78 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 KIF5BP33176 963 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 CYFIP1Q7L576 1253 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 ZNF654Q8IZM8 581 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 SMARCC2Q8TAQ2 1214 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 CUL5Q93034 780 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 HLA-CQ95604 372 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 RRP36Q96EU6 259 aaKnown RBP17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 TGS1Q96RS0 853 aaKnown RBP17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 SPZ1Q9BXG8 430 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 RNPEPQ9H4A4 650 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 LMCD1Q9NZU5 365 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 MTUS1Q9ULD2 1270 aa17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 RBM8AQ9Y5S9 174 aaKnown RBP17.47■□□□□ 0.39
CSNK1E-208ENST00000431611 LINC01553A4QN01 128 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 TREHO43280 583 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 DDAH1O94760 285 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 AMHP03971 560 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 SMARCA1P28370 1054 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 HOXC8P31273 242 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 ERVK-21P61565 698 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 SEMA3FQ13275 785 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 USP17L6PQ6QN14 398 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 CASC1Q6TDU7 716 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 GDPD5Q8WTR4 605 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 GPR20Q99678 358 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 LZTS2Q9BRK4 669 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 MYL10Q9BUA6 226 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 SUGCTQ9HAC7 445 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 LY9Q9HBG7 655 aa17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 SEC63Q9UGP8 760 aaKnown RBP17.46■□□□□ 0.39
CSNK1E-208ENST00000431611 PRC1O43663 620 aa17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 GNAT1P11488 350 aa17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 IRX6P78412 446 aaPredicted RBP17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 PLEKHG4Q58EX7 1191 aa17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 PCNX4Q63HM2 1172 aa17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 MYOCDQ8IZQ8 938 aa17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 MTA3Q9BTC8 594 aa17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 SETD4Q9NVD3 440 aa17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 ZNF215Q9UL58 517 aaPredicted RBP17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 INSL6Q9Y581 213 aa17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 MUC3AQ02505 3323 aa17.45■□□□□ 0.38
CSNK1E-208ENST00000431611 TRIP12Q14669 1992 aaPredicted RBP17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 PIK3CDO00329 1044 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 MEIS2O14770 477 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 CAND2O75155 1236 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 CTSHP09668 335 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 COL9A1P20849 921 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 GNAQP50148 359 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 MKRN4PQ13434 485 aaPredicted RBP17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 UTP14CQ5TAP6 766 aaKnown RBP17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 NFXL1Q6ZNB6 911 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 NLRX1Q86UT6 975 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 TMTC2Q8N394 836 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 SEPT8Q92599 483 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 SENP7Q9BQF6 1050 aa17.44■□□□□ 0.38
CSNK1E-208ENST00000431611 PRRC2BQ5JSZ5 2229 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-208ENST00000431611 CCDC69A6NI79 296 aa17.43■□□□□ 0.38
CSNK1E-208ENST00000431611 MCM5P33992 734 aa17.43■□□□□ 0.38
CSNK1E-208ENST00000431611 SP4Q02446 784 aa17.43■□□□□ 0.38
CSNK1E-208ENST00000431611 TRIM50Q86XT4 487 aa17.43■□□□□ 0.38
CSNK1E-208ENST00000431611 GIMAP8Q8ND71 665 aaPredicted RBP17.43■□□□□ 0.38
CSNK1E-208ENST00000431611 TMEM87BQ96K49 555 aa17.43■□□□□ 0.38
CSNK1E-208ENST00000431611 TELO2Q9Y4R8 837 aa17.43■□□□□ 0.38
CSNK1E-208ENST00000431611 SH2B2O14492 632 aaPredicted RBP17.42■□□□□ 0.38
CSNK1E-208ENST00000431611 PLEKHA8P1O95397 391 aa17.42■□□□□ 0.38
CSNK1E-208ENST00000431611 HTRA4P83105 476 aaPredicted RBP17.42■□□□□ 0.38
CSNK1E-208ENST00000431611 SRBD1Q8N5C6 995 aaKnown RBP17.42■□□□□ 0.38
CSNK1E-208ENST00000431611 C17orf80Q9BSJ5 609 aa17.42■□□□□ 0.38
CSNK1E-208ENST00000431611 PSTPIP2Q9H939 334 aa17.42■□□□□ 0.38
CSNK1E-208ENST00000431611 PTPRSQ13332 1948 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 CALM1P0DP23 149 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 CALM2P0DP24 149 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 CALM3P0DP25 149 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 RXRAP19793 462 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 ARHGAP4P98171 946 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 CMTR1Q8N1G2 835 aaKnown RBP17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 FBXO22Q8NEZ5 403 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 SP7Q8TDD2 431 aaPredicted RBP17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 GPRASP2Q96D09 838 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 CDHR1Q96JP9 859 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 OSBPL7Q9BZF2 842 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 LSG1Q9H089 658 aaKnown RBP17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 NRCAMQ92823 1304 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 MYH7BA7E2Y1 1941 aa17.41■□□□□ 0.38
CSNK1E-208ENST00000431611 XIRP2A4UGR9 3374 aa17.4■□□□□ 0.38
CSNK1E-208ENST00000431611 SLC27A2O14975 620 aa17.4■□□□□ 0.38
CSNK1E-208ENST00000431611 TCF7P36402 384 aaPredicted RBP17.4■□□□□ 0.38
CSNK1E-208ENST00000431611 LIFRP42702 1097 aa17.4■□□□□ 0.38
CSNK1E-208ENST00000431611 ADAM17P78536 824 aa17.4■□□□□ 0.38
CSNK1E-208ENST00000431611 LMBR1Q8WVP7 490 aa17.4■□□□□ 0.38
CSNK1E-208ENST00000431611 TOP1MTQ969P6 601 aa17.4■□□□□ 0.38
CSNK1E-208ENST00000431611 YME1L1Q96TA2 773 aa17.4■□□□□ 0.38
CSNK1E-208ENST00000431611 TRANK1O15050 2925 aa17.4■□□□□ 0.38
CSNK1E-208ENST00000431611 BAZ2BQ9UIF8 2168 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms