RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 CCDC43Q96MW1 224 aaKnown RBP15.85■□□□□ 0.13
MSH5-206ENST00000423982 ERGIC2Q96RQ1 377 aa15.85■□□□□ 0.13
MSH5-206ENST00000423982 RUFY1Q96T51 708 aa15.85■□□□□ 0.13
MSH5-206ENST00000423982 IL17RBQ9NRM6 502 aa15.85■□□□□ 0.13
MSH5-206ENST00000423982 PACSIN2Q9UNF0 486 aaPredicted RBP15.85■□□□□ 0.13
MSH5-206ENST00000423982 SIK3Q9Y2K2 1263 aa15.85■□□□□ 0.13
MSH5-206ENST00000423982 HSF2BPO75031 334 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 SLURP2P0DP57 97 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 CALML3P27482 149 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 MAGEA1P43355 309 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 CRKP46108 304 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 NNTQ13423 1086 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 ZSCAN29Q8IWY8 852 aaPredicted RBP15.84■□□□□ 0.13
MSH5-206ENST00000423982 TEKT1Q969V4 418 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 CCSER1Q9C0I3 900 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 HYOU1Q9Y4L1 999 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 ZNF233A6NK53 670 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 TECP42680 631 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 TCP10Q12799 353 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 LETM2Q2VYF4 491 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 TSGA10Q9BZW7 698 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 GJA3Q9Y6H8 435 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 CAPN7Q9Y6W3 813 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 MYH1P12882 1939 aa15.84■□□□□ 0.13
MSH5-206ENST00000423982 SEC24CP53992 1094 aa15.83■□□□□ 0.13
MSH5-206ENST00000423982 TFAP4Q01664 338 aa15.83■□□□□ 0.13
MSH5-206ENST00000423982 CXCL9Q07325 125 aa15.83■□□□□ 0.13
MSH5-206ENST00000423982 KLHDC7AQ5VTJ3 777 aa15.83■□□□□ 0.13
MSH5-206ENST00000423982 DYMQ7RTS9 669 aa15.83■□□□□ 0.13
MSH5-206ENST00000423982 PROCA1Q8NCQ7 364 aaPredicted RBP15.83■□□□□ 0.13
MSH5-206ENST00000423982 PNMA1Q8ND90 353 aa15.83■□□□□ 0.13
MSH5-206ENST00000423982 NDST4Q9H3R1 872 aa15.83■□□□□ 0.13
MSH5-206ENST00000423982 EPB41L5Q9HCM4 733 aa15.83■□□□□ 0.13
MSH5-206ENST00000423982 USP40Q9NVE5 1235 aa15.83■□□□□ 0.13
MSH5-206ENST00000423982 GPR75-ASB3A0A0A6YYF3 556 aa15.83■□□□□ 0.12
MSH5-206ENST00000423982 OPA1O60313 960 aa15.83■□□□□ 0.12
MSH5-206ENST00000423982 GUCY2DQ02846 1103 aa15.83■□□□□ 0.12
MSH5-206ENST00000423982 VWA3BQ502W6 1294 aa15.83■□□□□ 0.12
MSH5-206ENST00000423982 MCTP2Q6DN12 878 aa15.83■□□□□ 0.12
MSH5-206ENST00000423982 SUGP1Q8IWZ8 645 aaKnown RBP15.83■□□□□ 0.12
MSH5-206ENST00000423982 SLC44A5Q8NCS7 719 aa15.83■□□□□ 0.12
MSH5-206ENST00000423982 NOC3LQ8WTT2 800 aaKnown RBP15.83■□□□□ 0.12
MSH5-206ENST00000423982 KANSL2Q9H9L4 492 aa15.83■□□□□ 0.12
MSH5-206ENST00000423982 NLRC4Q9NPP4 1024 aa15.83■□□□□ 0.12
MSH5-206ENST00000423982 ZNRF3Q9ULT6 936 aa15.83■□□□□ 0.12
MSH5-206ENST00000423982 A0A1W2PQJ5 194 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 ORC4O43929 436 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 CCNT1O60563 726 aaKnown RBP15.82■□□□□ 0.12
MSH5-206ENST00000423982 FTCDO95954 541 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 MNAT1P51948 309 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 RHBDL3P58872 404 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 NFIAQ12857 509 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 LRRC41Q15345 812 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 ZNF572Q7Z3I7 529 aaPredicted RBP15.82■□□□□ 0.12
MSH5-206ENST00000423982 BICDL2A1A5D9 508 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 TCP1P17987 556 aaKnown RBP15.82■□□□□ 0.12
MSH5-206ENST00000423982 CDK17Q00537 523 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 ENOX2Q16206 610 aaKnown RBP15.82■□□□□ 0.12
MSH5-206ENST00000423982 PTPROQ16827 1216 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 RBM26Q5T8P6 1007 aaKnown RBP15.82■□□□□ 0.12
MSH5-206ENST00000423982 EMBQ6PCB8 327 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 FAM107BQ9H098 131 aa15.82■□□□□ 0.12
MSH5-206ENST00000423982 BRCA1P38398 1863 aaKnown RBP15.82■□□□□ 0.12
MSH5-206ENST00000423982 HEXIM1O94992 359 aaKnown RBP15.81■□□□□ 0.12
MSH5-206ENST00000423982 KIF5BP33176 963 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 APOBEC3HQ6NTF7 200 aaKnown RBP15.81■□□□□ 0.12
MSH5-206ENST00000423982 GBP6Q6ZN66 633 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 SLF2Q8IX21 1173 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 PIK3R5Q8WYR1 880 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 BAP1Q92560 729 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 ALS2CR12Q96Q35 445 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 MMTAG2Q9BU76 263 aaKnown RBP15.81■□□□□ 0.12
MSH5-206ENST00000423982 TDRD3Q9H7E2 651 aaKnown RBP15.81■□□□□ 0.12
MSH5-206ENST00000423982 DDX4Q9NQI0 724 aaKnown RBP15.81■□□□□ 0.12
MSH5-206ENST00000423982 MAD2L2Q9UI95 211 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 CLRN2A0PK11 232 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 PAFAH1B1P43034 410 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 SKOR1P84550 965 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 FIGNQ5HY92 759 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 CDC42EP5Q6NZY7 148 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 FAM114A1Q8IWE2 563 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 TCP11L1Q9NUJ3 509 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 GAKO14976 1311 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 STXBP3O00186 592 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 EPB41P11171 864 aaKnown RBP15.81■□□□□ 0.12
MSH5-206ENST00000423982 HNRNPH3P31942 346 aaKnown RBP15.81■□□□□ 0.12
MSH5-206ENST00000423982 TDRD12Q587J7 1177 aaKnown RBP15.81■□□□□ 0.12
MSH5-206ENST00000423982 RSBN1LQ6PCB5 846 aaPredicted RBP15.81■□□□□ 0.12
MSH5-206ENST00000423982 DNAAF5Q86Y56 855 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 CAVIN3Q969G5 261 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 YY1AP1Q9H869 796 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 ATP8A2Q9NTI2 1148 aa15.81■□□□□ 0.12
MSH5-206ENST00000423982 MAST2Q6P0Q8 1798 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 PRLRP16471 622 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 YBX3P16989 372 aaKnown RBP eCLIP15.8■□□□□ 0.12
MSH5-206ENST00000423982 LSP1P33241 339 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 ARID5AQ03989 594 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 ITIH3Q06033 890 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 GRIPAP1Q4V328 841 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 CFAP58Q5T655 872 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms