RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SELPP16109 830 aa17.45■□□□□ 0.38
USB1-202ENST00000423271 RBL2Q08999 1139 aa17.45■□□□□ 0.38
USB1-202ENST00000423271 NEDD9Q14511 834 aa17.45■□□□□ 0.38
USB1-202ENST00000423271 TRIM71Q2Q1W2 868 aaKnown RBP17.45■□□□□ 0.38
USB1-202ENST00000423271 METTL7BQ6UX53 244 aa17.45■□□□□ 0.38
USB1-202ENST00000423271 LRRC8DQ7L1W4 858 aa17.45■□□□□ 0.38
USB1-202ENST00000423271 KCNB2Q92953 911 aa17.45■□□□□ 0.38
USB1-202ENST00000423271 FTOQ9C0B1 505 aaKnown RBP eCLIP17.45■□□□□ 0.38
USB1-202ENST00000423271 FAM217BQ9NTX9 383 aaPredicted RBP17.45■□□□□ 0.38
USB1-202ENST00000423271 VCANP13611 3396 aa17.44■□□□□ 0.38
USB1-202ENST00000423271 NOP56O00567 594 aaKnown RBP17.44■□□□□ 0.38
USB1-202ENST00000423271 CKBP12277 381 aa17.44■□□□□ 0.38
USB1-202ENST00000423271 ACTN1P12814 892 aa17.44■□□□□ 0.38
USB1-202ENST00000423271 ATP2A2P16615 1042 aaKnown RBP17.44■□□□□ 0.38
USB1-202ENST00000423271 CDC27P30260 824 aa17.44■□□□□ 0.38
USB1-202ENST00000423271 SP4Q02446 784 aa17.44■□□□□ 0.38
USB1-202ENST00000423271 XRRA1Q6P2D8 792 aa17.44■□□□□ 0.38
USB1-202ENST00000423271 TRIM50Q86XT4 487 aa17.44■□□□□ 0.38
USB1-202ENST00000423271 JAKMIP1Q96N16 626 aaKnown RBP17.44■□□□□ 0.38
USB1-202ENST00000423271 GPR20Q99678 358 aa17.44■□□□□ 0.38
USB1-202ENST00000423271 PRDM12Q9H4Q4 367 aa17.44■□□□□ 0.38
USB1-202ENST00000423271 SNX14Q9Y5W7 946 aa17.44■□□□□ 0.38
USB1-202ENST00000423271 PTPRSQ13332 1948 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 H3BRB1 525 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 HMGB1P09429 215 aaKnown RBP17.43■□□□□ 0.38
USB1-202ENST00000423271 ITGB5P18084 799 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 HSPA4P34932 840 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 NAPAP54920 295 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 PTK7Q13308 1070 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 TCTN1Q2MV58 587 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 TRAF7Q6Q0C0 670 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 NLRX1Q86UT6 975 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.43■□□□□ 0.38
USB1-202ENST00000423271 TUT1Q9H6E5 874 aaKnown RBP17.43■□□□□ 0.38
USB1-202ENST00000423271 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
USB1-202ENST00000423271 PCDHA6Q9UN73 950 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 PCDHA8Q9Y5H6 950 aa17.43■□□□□ 0.38
USB1-202ENST00000423271 SPDYE3A6NKU9 549 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 STXBP3O00186 592 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 NBNO60934 754 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 ATP9AO75110 1047 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 SMIM10L2AP0DMW4 78 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 SMIM10L2BP0DMW5 78 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 KCNA2P16389 499 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 APOBRQ0VD83 1088 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 MBTPS1Q14703 1052 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 ZNF618Q5T7W0 954 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 UTP14CQ5TAP6 766 aaKnown RBP17.42■□□□□ 0.38
USB1-202ENST00000423271 Q6ZUG5 572 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 GPRASP2Q96D09 838 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 PGBD1Q96JS3 809 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 SENP7Q9BQF6 1050 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 PKD2L1Q9P0L9 805 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 PCDHA11Q9Y5I1 949 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 UBIAD1Q9Y5Z9 338 aa17.42■□□□□ 0.38
USB1-202ENST00000423271 V9GY48 417 aaPredicted RBP17.42■□□□□ 0.38
USB1-202ENST00000423271 C17orf102A2RUQ5 167 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 CXCL10P02778 98 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 HOXC8P31273 242 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 FGD1P98174 961 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 PPP2R2DQ66LE6 453 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 PPP1R18Q6NYC8 613 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 SERINC5Q86VE9 423 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 USP38Q8NB14 1042 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 BRF1Q92994 677 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 SLC9A7Q96T83 725 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 USP26Q9BXU7 913 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 SLC28A3Q9HAS3 691 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 RIC8AQ9NPQ8 531 aa17.41■□□□□ 0.38
USB1-202ENST00000423271 DLL1O00548 723 aa17.4■□□□□ 0.38
USB1-202ENST00000423271 ADD1P35611 737 aaKnown RBP17.4■□□□□ 0.38
USB1-202ENST00000423271 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.38
USB1-202ENST00000423271 RCAN1P53805 252 aa17.4■□□□□ 0.38
USB1-202ENST00000423271 MTMR1Q13613 665 aa17.4■□□□□ 0.38
USB1-202ENST00000423271 ADGRE1Q14246 886 aa17.4■□□□□ 0.38
USB1-202ENST00000423271 BLOC1S2Q6QNY1 142 aa17.4■□□□□ 0.38
USB1-202ENST00000423271 ATP6V0A1Q93050 837 aa17.4■□□□□ 0.38
USB1-202ENST00000423271 RNPEPQ9H4A4 650 aa17.4■□□□□ 0.38
USB1-202ENST00000423271 TREHO43280 583 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 BAIAP3O94812 1187 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 ARHGEF15O94989 841 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 REC8O95072 547 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 CA3P07451 260 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 RPS6KB1P23443 525 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 THPOP40225 353 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 ADCY7P51828 1080 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 WDR5P61964 334 aaKnown RBP17.39■□□□□ 0.37
USB1-202ENST00000423271 CNKSR3Q6P9H4 555 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 TMCO2Q7Z6W1 182 aaPredicted RBP17.39■□□□□ 0.37
USB1-202ENST00000423271 HERC6Q8IVU3 1022 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 CDHR1Q96JP9 859 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 GAS2L1Q99501 681 aaPredicted RBP17.39■□□□□ 0.37
USB1-202ENST00000423271 JADE2Q9NQC1 790 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 SETD4Q9NVD3 440 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 TMEM260Q9NX78 707 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 BARHL2Q9NY43 387 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 NID2Q14112 1375 aa17.39■□□□□ 0.37
USB1-202ENST00000423271 SPTBN5Q9NRC6 3674 aaKnown RBP17.38■□□□□ 0.37
USB1-202ENST00000423271 SMCO2A6NFE2 343 aa17.38■□□□□ 0.37
USB1-202ENST00000423271 hCG_1984214I3L0E3 225 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms