RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 MTUS1Q9ULD2 1270 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 TPX2Q9ULW0 747 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PCDHA4Q9UN74 947 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SSX2IPQ9Y2D8 614 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 LEMD3Q9Y2U8 911 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ARL2BPQ9Y2Y0 163 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 REXO2Q9Y3B8 237 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ATP6V0A2Q9Y487 856 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 USP15Q9Y4E8 981 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ACTL7BQ9Y614 415 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SLC4A7Q9Y6M7 1214 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 USH1CQ9Y6N9 552 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PFASO15067 1338 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 XDHP47989 1333 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PCDH11XQ9BZA7 1347 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZNF532Q9HCE3 1301 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 NCKAP5LQ9HCH0 1330 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KDM3AQ9Y4C1 1321 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 ADAMTS7Q9UKP4 1686 aa3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 PARP4Q9UKK3 1724 aaKnown RBP3.1□□□□□ -1.91
SNORD88.1-201ENST00000408684 KIF1AQ12756 1690 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 GTPBP10A4D1E9 387 aaKnown RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZNF233A6NK53 670 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 TTC36A6NLP5 189 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 ANKRD65E5RJM6 399 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 KCNK3O14649 394 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 CETN3O15182 167 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 MAPK13O15264 365 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 FOXN1O15353 648 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PDE8AO60658 829 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 SRGAP2O75044 1071 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PPFIA2O75334 1257 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PALMO75781 387 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZMYND10O75800 440 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 SMNDC1O75940 238 aaKnown RBP eCLIP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 RTN3O95197 1032 aaPredicted RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZWINTO95229 277 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 MOCS3O95396 460 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 EYA4O95677 639 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 STARD3NLO95772 234 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 GAS8O95995 478 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 ANXA1P04083 346 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 ATP5BP06576 529 aaKnown RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 MMEP08473 750 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 CLTAP09496 248 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 FGRP09769 529 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 H2AFZP0C0S5 128 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 NQO1P15559 274 aaKnown RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 LMNB1P20700 586 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 DRD4P21917 467 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 SCP2P22307 547 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 CHRNA3P32297 505 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PCK1P35558 622 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 EIF4A3P38919 411 aaKnown RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 CETN2P41208 172 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 MMP13P45452 471 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 CARSP49589 748 aaKnown RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 SLC18A1P54219 525 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PMS2P54278 862 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 MARSP56192 900 aaKnown RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 RAB15P59190 212 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 MAGOHP61326 146 aaKnown RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 MXRA7P84157 204 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 IL9RQ01113 521 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 CTDSPL2Q05D32 466 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PPARAQ07869 468 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZNF844Q08AG5 666 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 KLHL30Q0D2K2 578 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 CETN1Q12798 172 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 STRN3Q13033 797 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 CALCOCO2Q13137 446 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 TMED1Q13445 227 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 BIRC2Q13490 618 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 CUL3Q13618 768 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 MAP7Q14244 749 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 TAF11Q15544 211 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZNF174Q15697 407 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PROSER3Q2NL68 480 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 EDRF1Q3B7T1 1238 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 RRP12Q5JTH9 1297 aaKnown RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 KRT79Q5XKE5 535 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 NUGGCQ68CJ6 796 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 RNF43Q68DV7 783 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 SMYD5Q6GMV2 418 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 MFSD5Q6N075 450 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PHLDB3Q6NSJ2 640 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 IRGCQ6NXR0 463 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PPP1R2P3Q6NXS1 205 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 MIS18BP1Q6P0N0 1132 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PDXDC1Q6P996 788 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 CCDC174Q6PII3 467 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 STXBP4Q6ZWJ1 553 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 TMTC3Q6ZXV5 915 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 H2AFVQ71UI9 128 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 INTS8Q75QN2 995 aaKnown RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 BZW1Q7L1Q6 419 aaKnown RBP3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 RRAGAQ7L523 313 aa3.09□□□□□ -1.91
SNORD88.1-201ENST00000408684 PEX26Q7Z412 305 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms