RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ZSCAN29Q8IWY8 852 aaPredicted RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 RAPGEF5Q92565 580 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 BLOC1S4Q9NUP1 217 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 MAD2L2Q9UI95 211 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 BCL9LQ86UU0 1499 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 KRIT1O00522 736 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 SLC9A1P19634 815 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 ZNF844Q08AG5 666 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 GRB10Q13322 594 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 CDC37Q16543 378 aaPredicted RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 SOGA3Q5TF21 947 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 GJB7Q6PEY0 223 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 TAX1BP1Q86VP1 789 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 DZIP1Q86YF9 867 aaKnown RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 LARP4BQ92615 738 aaKnown RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 THOC1Q96FV9 657 aaKnown RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 SEC16BQ96JE7 1060 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 MLXIPLQ9NP71 852 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 CHORDC1Q9UHD1 332 aaPredicted RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 TPX2Q9ULW0 747 aaKnown RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 NR2E1Q9Y466 385 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 ACCSLQ4AC99 568 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 ERFEQ4G0M1 354 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 DCAF17Q5H9S7 520 aaPredicted RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 FAM228AQ86W67 206 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 SPAG5Q96R06 1193 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 TMEM47Q9BQJ4 181 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 BRIP1Q9BX63 1249 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 TAF1DQ9H5J8 278 aaPredicted RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 PNMA2Q9UL42 364 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 L3MBTL1Q9Y468 752 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 CEP83Q9Y592 693 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 CD2APQ9Y5K6 639 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 LRP6O75581 1613 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 NEBLO76041 1014 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 NOL4O94818 638 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 UPP2O95045 317 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 ABCB4P21439 1286 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 CLNS1AP54105 237 aaKnown RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 TNNC1P63316 161 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 ZNF211Q13398 564 aaPredicted RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 PPP2R5AQ15172 486 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 SNCBQ16143 134 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 ECM1Q16610 540 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 UBE2SQ16763 222 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 CCDC38Q502W7 563 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 NEK8Q86SG6 692 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 TBC1D1Q86TI0 1168 aaPredicted RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 PARP9Q8IXQ6 854 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 USP38Q8NB14 1042 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 BCAS3Q9H6U6 928 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 TMBIM4Q9HC24 238 aa10.5□□□□□ -0.73
SMC1B-202ENST00000404354 SEPT11Q9NVA2 429 aaKnown RBP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMC1B-202ENST00000404354 CHD4Q14839 1912 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 A0A1W2PQJ5 194 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 E9PMD0 336 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 PRLRP16471 622 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 ELF1P32519 619 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 PTK2Q05397 1052 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 ADCY1Q08828 1119 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 NEDD9Q14511 834 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 CALCRLQ16602 461 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 UBAP2Q5T6F2 1119 aaKnown RBP10.49□□□□□ -0.73
SMC1B-202ENST00000404354 ZNF662Q6ZS27 426 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 CACNA2D3Q8IZS8 1091 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 FUKQ8N0W3 1084 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 MGARPQ8TDB4 240 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 C7orf25Q9BPX7 421 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 TACO1Q9BSH4 297 aaKnown RBP10.49□□□□□ -0.73
SMC1B-202ENST00000404354 BTG4Q9NY30 223 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 DDX60Q8IY21 1712 aaKnown RBP10.49□□□□□ -0.73
SMC1B-202ENST00000404354 CTNND1O60716 968 aaKnown RBP10.49□□□□□ -0.73
SMC1B-202ENST00000404354 KRT18P05783 430 aaKnown RBP10.49□□□□□ -0.73
SMC1B-202ENST00000404354 GBP2P32456 591 aaPredicted RBP10.49□□□□□ -0.73
SMC1B-202ENST00000404354 NKX1-1Q15270 411 aaPredicted RBP10.49□□□□□ -0.73
SMC1B-202ENST00000404354 GRIK5Q16478 980 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 DAAM2Q86T65 1068 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 SH3RF3Q8TEJ3 882 aaPredicted RBP10.49□□□□□ -0.73
SMC1B-202ENST00000404354 INPP4AQ96PE3 977 aaPredicted RBP10.49□□□□□ -0.73
SMC1B-202ENST00000404354 PNMA5Q96PV4 448 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 IKZF4Q9H2S9 585 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 BARHL2Q9NY43 387 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 KIF1AQ12756 1690 aa10.49□□□□□ -0.73
SMC1B-202ENST00000404354 FOXO6A8MYZ6 492 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 HMGB1P1B2RPK0 211 aaPredicted RBP10.48□□□□□ -0.73
SMC1B-202ENST00000404354 SMTNP53814 917 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 NAB2Q15742 525 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 ASTE1Q2TB18 679 aaPredicted RBP10.48□□□□□ -0.73
SMC1B-202ENST00000404354 HERC4Q5GLZ8 1057 aaPredicted RBP10.48□□□□□ -0.73
SMC1B-202ENST00000404354 MAEAQ7L5Y9 396 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 TEX2Q8IWB9 1127 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 ANKS1AQ92625 1134 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 TSG101Q99816 390 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 MTA3Q9BTC8 594 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 MTFR1LQ9H019 292 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 ADAMTS7Q9UKP4 1686 aa10.48□□□□□ -0.73
SMC1B-202ENST00000404354 COL1A1P02452 1464 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms