RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 ANAPC4Q9UJX5 808 aa11.18□□□□□ -0.62
HMGCLL1-205ENST00000398661 SERPINA10Q9UK55 444 aa11.18□□□□□ -0.62
HMGCLL1-205ENST00000398661 CDK5RAP2Q96SN8 1893 aa11.18□□□□□ -0.62
HMGCLL1-205ENST00000398661 ECM29Q5VYK3 1845 aa11.18□□□□□ -0.62
HMGCLL1-205ENST00000398661 LRRC10BA6NIK2 292 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 GOLGA8AA7E2F4 631 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 E7EVH7 732 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 PPP1R12BO60237 982 aaPredicted RBP11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 TOB1P50616 345 aaPredicted RBP11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 C9orf131Q5VYM1 1079 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 ZNF572Q7Z3I7 529 aaPredicted RBP11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 CREG2Q8IUH2 290 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 ZNF654Q8IZM8 581 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 OR8K1Q8NGG5 319 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 CYFIP2Q96F07 1278 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 RSRC1Q96IZ7 334 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 RNF41Q9H4P4 317 aaPredicted RBP11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 CNNM2Q9H8M5 875 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 SPATS2LQ9NUQ6 558 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 CTNND2Q9UQB3 1225 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 FER1L6Q2WGJ9 1857 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 ERICH2A1L162 156 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 DNM1LO00429 736 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 ADAMTS3O15072 1205 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 COBLO75128 1261 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 TAL1P17542 331 aaPredicted RBP11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 SHMT1P34896 483 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 AFMP43652 599 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 MRPS25P82663 173 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 ICA1Q05084 483 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 ITIH3Q06033 890 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 ADCY2Q08462 1091 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 ZYXQ15942 572 aaKnown RBP11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 CFAP58Q5T655 872 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 AP1ARQ63HQ0 302 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 USP17L2Q6R6M4 530 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 SH3GL3Q99963 347 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 SLC26A6Q9BXS9 759 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 VAT1LQ9HCJ6 419 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 FRMPD2Q68DX3 1309 aaPredicted RBP11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 WDR19Q8NEZ3 1342 aa11.17□□□□□ -0.62
HMGCLL1-205ENST00000398661 EME2A4GXA9 379 aaPredicted RBP11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 ZNF233A6NK53 670 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 FZD9O00144 591 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 PLCG2P16885 1265 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 TNFRSF8P28908 595 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 HIRAP54198 1017 aaPredicted RBP11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 SBK1Q52WX2 424 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 ANKRD20A8PQ5CZ79 823 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 USP49Q70CQ1 688 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 NOSTRINQ8IVI9 506 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 IQCKQ8N0W5 287 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 SPICE1Q8N0Z3 855 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 ZNF526Q8TF50 670 aaPredicted RBP11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 TATDN2Q93075 761 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 CCDC43Q96MW1 224 aaKnown RBP11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 OSBPL7Q9BZF2 842 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 STIM2Q9P246 746 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 SNX12Q9UMY4 172 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 HTTP42858 3142 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 MYH1P12882 1939 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 TTC26A0AVF1 554 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 RCCD1A6NED2 376 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 CASP1P29466 404 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 SPAG1Q07617 926 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 DPYDQ12882 1025 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 SPRED3Q2MJR0 410 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 PPP4R3AQ6IN85 833 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 FAM43BQ6ZT52 329 aaPredicted RBP11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 C16orf86Q6ZW13 317 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 SPATA4Q8NEY3 305 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 RASSF8Q8NHQ8 419 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 HOOK2Q96ED9 719 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 DNAJC7Q99615 494 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 LACRTQ9GZZ8 138 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 UBA5Q9GZZ9 404 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 KIF9Q9HAQ2 790 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 BATF3Q9NR55 127 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 KCNJ14Q9UNX9 436 aa11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 SRPRBQ9Y5M8 271 aaKnown RBP11.16□□□□□ -0.62
HMGCLL1-205ENST00000398661 MGRN1O60291 552 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 LMNB1P20700 586 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 MATR3P43243 847 aaKnown RBP eCLIP11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 SNAP25P60880 206 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 UBXN1Q04323 297 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 XRCC4Q13426 336 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 RASA3Q14644 834 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 TSR1Q2NL82 804 aaKnown RBP11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 HAUS3Q68CZ6 603 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 WDR59Q6PJI9 974 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 CD302Q8IX05 232 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 PAGE5Q96GU1 130 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 CALR3Q96L12 384 aaKnown RBP11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 PURBQ96QR8 312 aaKnown RBP11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 CSRNP2Q9H175 543 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 SUGT1Q9Y2Z0 365 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 LUC7L2Q9Y383 392 aaKnown RBP11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 KCNJ18B7U540 433 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 OPLAHO14841 1288 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms