RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 PPTC7Q8NI37 304 aa18.6■□□□□ 0.57
AP1S3-202ENST00000396653 ETNPPLQ8TBG4 499 aa18.6■□□□□ 0.57
AP1S3-202ENST00000396653 SLC5A5Q92911 643 aa18.6■□□□□ 0.57
AP1S3-202ENST00000396653 FAM20AQ96MK3 541 aa18.6■□□□□ 0.57
AP1S3-202ENST00000396653 RIT2Q99578 217 aa18.6■□□□□ 0.57
AP1S3-202ENST00000396653 MLXIPQ9HAP2 919 aa18.6■□□□□ 0.57
AP1S3-202ENST00000396653 A6NJR5 290 aa18.59■□□□□ 0.57
AP1S3-202ENST00000396653 DNM1LO00429 736 aa18.59■□□□□ 0.57
AP1S3-202ENST00000396653 NEMFO60524 1076 aa18.59■□□□□ 0.57
AP1S3-202ENST00000396653 PGK1P00558 417 aa18.59■□□□□ 0.57
AP1S3-202ENST00000396653 C6orf222P0C671 652 aaPredicted RBP18.59■□□□□ 0.57
AP1S3-202ENST00000396653 HOXD8P13378 290 aaPredicted RBP18.59■□□□□ 0.57
AP1S3-202ENST00000396653 DDIT3P35638 169 aa18.59■□□□□ 0.57
AP1S3-202ENST00000396653 ITGB3BPQ13352 177 aaPredicted RBP18.59■□□□□ 0.57
AP1S3-202ENST00000396653 LRRC41Q15345 812 aa18.59■□□□□ 0.57
AP1S3-202ENST00000396653 FSCN1Q16658 493 aaKnown RBP18.59■□□□□ 0.57
AP1S3-202ENST00000396653 CYFIP1Q7L576 1253 aa18.59■□□□□ 0.57
AP1S3-202ENST00000396653 POTEDQ86YR6 584 aa18.59■□□□□ 0.57
AP1S3-202ENST00000396653 PCSK9Q8NBP7 692 aaKnown RBP18.59■□□□□ 0.57
AP1S3-202ENST00000396653 TSEN34Q9BSV6 310 aaKnown RBP18.59■□□□□ 0.57
AP1S3-202ENST00000396653 JPH1Q9HDC5 661 aaPredicted RBP18.59■□□□□ 0.57
AP1S3-202ENST00000396653 CENPFP49454 3210 aa18.59■□□□□ 0.57
AP1S3-202ENST00000396653 POTEFA5A3E0 1075 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 DHX15O43143 795 aaKnown RBP18.58■□□□□ 0.56
AP1S3-202ENST00000396653 ZEB2O60315 1214 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 BRD1O95696 1058 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 F13A1P00488 732 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 TFRCP02786 760 aaKnown RBP18.58■□□□□ 0.56
AP1S3-202ENST00000396653 MMP3P08254 477 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 PTGS1P23219 599 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 MCM7P33993 719 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 CCSAPQ6IQ19 270 aaPredicted RBP18.58■□□□□ 0.56
AP1S3-202ENST00000396653 SLFN12Q8IYM2 578 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 SPATA33Q96N06 139 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 TEKT3Q9BXF9 490 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.58■□□□□ 0.56
AP1S3-202ENST00000396653 PKD2L1Q9P0L9 805 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 SLC9A2Q9UBY0 812 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 TCEAL9Q9UHQ7 104 aa18.58■□□□□ 0.56
AP1S3-202ENST00000396653 SCN10AQ9Y5Y9 1956 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 MYADML2A6NDP7 307 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 MOXD2PA6NHM9 499 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 KBTBD13C9JR72 458 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 LAD1O00515 517 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 KPNA6O60684 536 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 PSMD10O75832 226 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 BAG4O95429 457 aaKnown RBP18.57■□□□□ 0.56
AP1S3-202ENST00000396653 BMP15O95972 392 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 ATP2B1P20020 1258 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 KRT76Q01546 638 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 PKP1Q13835 747 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 CALCRLQ16602 461 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 LRCH2Q5VUJ6 765 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 ZNF746Q6NUN9 644 aaPredicted RBP18.57■□□□□ 0.56
AP1S3-202ENST00000396653 AFG1LQ8WV93 481 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 POLR3EQ9NVU0 708 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 PCDHB6Q9Y5E3 794 aa18.57■□□□□ 0.56
AP1S3-202ENST00000396653 ELP1O95163 1332 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 MYH9P35579 1960 aaKnown RBP18.56■□□□□ 0.56
AP1S3-202ENST00000396653 NOP56O00567 594 aaKnown RBP18.56■□□□□ 0.56
AP1S3-202ENST00000396653 GAS7O60861 476 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 NUCB2P80303 420 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 ZNF174Q15697 407 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 HSDL1Q3SXM5 330 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 GNASQ5JWF2 1037 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 HAS1Q92839 578 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 MTMR9Q96QG7 549 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 GPR20Q99678 358 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 BCAS3Q9H6U6 928 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 CIZ1Q9ULV3 898 aaPredicted RBP18.56■□□□□ 0.56
AP1S3-202ENST00000396653 PHF24Q9UPV7 400 aa18.56■□□□□ 0.56
AP1S3-202ENST00000396653 CCDC85CA6NKD9 419 aa18.55■□□□□ 0.56
AP1S3-202ENST00000396653 PPFIA4O75335 1185 aa18.55■□□□□ 0.56
AP1S3-202ENST00000396653 OR52Z1P0C646 297 aa18.55■□□□□ 0.56
AP1S3-202ENST00000396653 MNX1P50219 401 aaPredicted RBP18.55■□□□□ 0.56
AP1S3-202ENST00000396653 BEX3Q00994 111 aa18.55■□□□□ 0.56
AP1S3-202ENST00000396653 NBR1Q14596 966 aa18.55■□□□□ 0.56
AP1S3-202ENST00000396653 DGKDQ16760 1214 aa18.55■□□□□ 0.56
AP1S3-202ENST00000396653 B3GNT9Q6UX72 402 aa18.55■□□□□ 0.56
AP1S3-202ENST00000396653 SMAP1Q8IYB5 467 aaPredicted RBP18.55■□□□□ 0.56
AP1S3-202ENST00000396653 RDM1Q8NG50 284 aa18.55■□□□□ 0.56
AP1S3-202ENST00000396653 TMEM60Q9H2L4 133 aa18.55■□□□□ 0.56
AP1S3-202ENST00000396653 MARCH6O60337 910 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 CABYRO75952 493 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 ATG7O95352 703 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 SFNP31947 248 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 PRPHP41219 470 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 IRX5P78411 483 aaPredicted RBP18.54■□□□□ 0.56
AP1S3-202ENST00000396653 ATP2C1P98194 919 aaPredicted RBP18.54■□□□□ 0.56
AP1S3-202ENST00000396653 PPP2R5CQ13362 524 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 KCNA10Q16322 511 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 C4orf32Q8N8J7 132 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 SEPT1Q8WYJ6 367 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 VAV3Q9UKW4 847 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 CEP131Q9UPN4 1083 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 ZDHHC9Q9Y397 364 aa18.54■□□□□ 0.56
AP1S3-202ENST00000396653 MORC2Q9Y6X9 1032 aaPredicted RBP18.54■□□□□ 0.56
AP1S3-202ENST00000396653 EMSYQ7Z589 1322 aa18.53■□□□□ 0.56
AP1S3-202ENST00000396653 WDR64B1ANS9 1081 aa18.53■□□□□ 0.56
AP1S3-202ENST00000396653 DDX39AO00148 427 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms