RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 IQCF3P0C7M6 154 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 TGFB3P10600 412 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 CPA1P15085 419 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 ICAM3P32942 547 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 MFSD10Q14728 455 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 UBE2SQ16763 222 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 KIAA0753Q2KHM9 967 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 PCNX4Q63HM2 1172 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 TYW1BQ6NUM6 668 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 KCNV1Q6PIU1 500 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 DHX32Q7L7V1 743 aaKnown RBP12.69□□□□□ -0.38
TOM1-202ENST00000395736 DEFB128Q7Z7B8 93 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 KCNB2Q92953 911 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 CCDC136Q96JN2 1154 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 SPATA33Q96N06 139 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 C16orf70Q9BSU1 422 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 ALG1Q9BT22 464 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 RTEL1Q9NZ71 1219 aa12.69□□□□□ -0.38
TOM1-202ENST00000395736 YBX2Q9Y2T7 364 aaKnown RBP12.69□□□□□ -0.38
TOM1-202ENST00000395736 MYO15AQ9UKN7 3530 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 SPATA31C2B4DYI2 1134 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 PI4K2BG5E9Z4 385 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 STAM2O75886 525 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 PFKMP08237 780 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 ZNF200P98182 395 aaPredicted RBP12.68□□□□□ -0.38
TOM1-202ENST00000395736 RBL2Q08999 1139 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 TRIM71Q2Q1W2 868 aaKnown RBP12.68□□□□□ -0.38
TOM1-202ENST00000395736 WWC2Q6AWC2 1192 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 TRAF7Q6Q0C0 670 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 RPUSD2Q8IZ73 545 aaKnown RBP12.68□□□□□ -0.38
TOM1-202ENST00000395736 SMARCC2Q8TAQ2 1214 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 KATNAL1Q9BW62 490 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
TOM1-202ENST00000395736 NOD1Q9Y239 953 aa12.68□□□□□ -0.38
TOM1-202ENST00000395736 FIBPO43427 364 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 PPFIA4O75335 1185 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 LGALS2P05162 132 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 CDC27P30260 824 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 HOXC8P31273 242 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 HSPA4P34932 840 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 RFC2P35250 354 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 RABGGTBP53611 331 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 BFSP2Q13515 415 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 TCTN1Q2MV58 587 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 GNPTABQ3T906 1256 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 METTL7BQ6UX53 244 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 TRIM50Q86XT4 487 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 MICALL1Q8N3F8 863 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 C7orf31Q8N865 590 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 AFAP1L1Q8TED9 768 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 NKX2-4Q9H2Z4 354 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 MLXIPQ9HAP2 919 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 SIP14410 1827 aa12.67□□□□□ -0.38
TOM1-202ENST00000395736 ZNF318Q5VUA4 2279 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 KLF18A0A0U1RQI7 1052 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 ZBBXA8MT70 800 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 ZBTB43O43298 467 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 ATP9AO75110 1047 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 CKBP12277 381 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 MYOGP15173 224 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 KCNA2P16389 499 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 ITGB5P18084 799 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 KRT32Q14532 448 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 MBTPS1Q14703 1052 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 RTN1Q16799 776 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 LRRC8DQ7L1W4 858 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 CYFIP1Q7L576 1253 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 CUL5Q93034 780 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 GPR20Q99678 358 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 MTIF3Q9H2K0 278 aaKnown RBP12.66□□□□□ -0.38
TOM1-202ENST00000395736 RBM28Q9NW13 759 aaKnown RBP12.66□□□□□ -0.38
TOM1-202ENST00000395736 SLC4A7Q9Y6M7 1214 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 NID2Q14112 1375 aa12.66□□□□□ -0.38
TOM1-202ENST00000395736 COL4A4P53420 1690 aaPredicted RBP12.65□□□□□ -0.38
TOM1-202ENST00000395736 GOLGA8AA7E2F4 631 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 GOLGA8BA8MQT2 603 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 PRR33A8MZF0 331 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 STXBP3O00186 592 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 NBNO60934 754 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 SELPP16109 830 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 PTK7Q13308 1070 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 NEDD9Q14511 834 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 RAB30Q15771 203 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 XRRA1Q6P2D8 792 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 RETREG2Q8NC44 543 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 FBXL18Q96ME1 805 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 PCDHA6Q9UN73 950 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 PCDHA8Q9Y5H6 950 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 UBIAD1Q9Y5Z9 338 aa12.65□□□□□ -0.38
TOM1-202ENST00000395736 H3BRB1 525 aa12.64□□□□□ -0.39
TOM1-202ENST00000395736 ADAMTS3O15072 1205 aa12.64□□□□□ -0.39
TOM1-202ENST00000395736 ARHGEF15O94989 841 aa12.64□□□□□ -0.39
TOM1-202ENST00000395736 CXCL10P02778 98 aa12.64□□□□□ -0.39
TOM1-202ENST00000395736 ATP2A2P16615 1042 aaKnown RBP12.64□□□□□ -0.39
TOM1-202ENST00000395736 RCAN1P53805 252 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms