RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 AAK1Q2M2I8 961 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 CYFIP1Q7L576 1253 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 CYP2W1Q8TAV3 490 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 PGBD1Q96JS3 809 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 UHRF1Q96T88 793 aaPredicted RBP10.2□□□□□ -0.78
ATG4A-205ENST00000394892 GPR20Q99678 358 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 NKX2-4Q9H2Z4 354 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 PSTPIP2Q9H939 334 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 UBIAD1Q9Y5Z9 338 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 V9GY48 417 aaPredicted RBP10.2□□□□□ -0.78
ATG4A-205ENST00000394892 VCANP13611 3396 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 PRUNE2Q8WUY3 3088 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 KLF18A0A0U1RQI7 1052 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 STXBP3O00186 592 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 EDIL3O43854 480 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 CXCL10P02778 98 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 CALM1P0DP23 149 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 CALM2P0DP24 149 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 CALM3P0DP25 149 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 CKBP12277 381 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 ADAM17P78536 824 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 TRAF1Q13077 416 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
ATG4A-205ENST00000394892 PKN1Q16512 942 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 ZNF618Q5T7W0 954 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 RNF20Q5VTR2 975 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 KCNV1Q6PIU1 500 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 METTL7BQ6UX53 244 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 HEATR3Q7Z4Q2 680 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 TMCO2Q7Z6W1 182 aaPredicted RBP10.19□□□□□ -0.78
ATG4A-205ENST00000394892 SMARCC2Q8TAQ2 1214 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 JAKMIP1Q96N16 626 aaKnown RBP10.19□□□□□ -0.78
ATG4A-205ENST00000394892 PCYT2Q99447 389 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 AGXT2Q9BYV1 514 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 TMEM260Q9NX78 707 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 PCDHA6Q9UN73 950 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 PCDHA8Q9Y5H6 950 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 SLC4A7Q9Y6M7 1214 aa10.19□□□□□ -0.78
ATG4A-205ENST00000394892 GSTTP1A0A1W2PQM5 241 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 EPOPA6NHQ4 379 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 GOLGA8AA7E2F4 631 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 GOLGA8BA8MQT2 603 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 TREHO43280 583 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 ZBTB43O43298 467 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 FIBPO43427 364 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 PPFIA3O75145 1194 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 STAM2O75886 525 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 SMIM10L2AP0DMW4 78 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 SMIM10L2BP0DMW5 78 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 SELPP16109 830 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 CLK2P49760 499 aaKnown RBP10.18□□□□□ -0.78
ATG4A-205ENST00000394892 NTRK3Q16288 839 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 RTN1Q16799 776 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 PPP2R2DQ66LE6 453 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 XRRA1Q6P2D8 792 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 Q6ZUG5 572 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 SERINC5Q86VE9 423 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 FBXL16Q8N461 479 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 C7orf31Q8N865 590 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 AFAP1L1Q8TED9 768 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 CRYGNQ8WXF5 182 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 BRF1Q92994 677 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 SENP7Q9BQF6 1050 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 C1QTNF1Q9BXJ1 281 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 RNPEPQ9H4A4 650 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 MLXIPQ9HAP2 919 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 RIC8AQ9NPQ8 531 aa10.18□□□□□ -0.78
ATG4A-205ENST00000394892 SEC63Q9UGP8 760 aaKnown RBP10.18□□□□□ -0.78
ATG4A-205ENST00000394892 NID2Q14112 1375 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 H3BRB1 525 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 GTPBP6O43824 516 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-205ENST00000394892 PFKMP08237 780 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 ARP10275 920 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 ATP2A2P16615 1042 aaKnown RBP10.17□□□□□ -0.78
ATG4A-205ENST00000394892 RPS6KB1P23443 525 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 RFC2P35250 354 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 DEFB103AP81534 67 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 SP4Q02446 784 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 PTK7Q13308 1070 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 ITGB3BPQ13352 177 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-205ENST00000394892 BFSP2Q13515 415 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 TOB2Q14106 344 aaPredicted RBP10.17□□□□□ -0.78
ATG4A-205ENST00000394892 SKIV2LQ15477 1246 aaKnown RBP10.17□□□□□ -0.78
ATG4A-205ENST00000394892 GNPTABQ3T906 1256 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 LRRC8DQ7L1W4 858 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 RETREG2Q8NC44 543 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 CAGE1Q8TC20 777 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 CUL5Q93034 780 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 GPRASP2Q96D09 838 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 ZBTB10Q96DT7 871 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 FAM122AQ96E09 287 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 LARP6Q9BRS8 491 aaKnown RBP10.17□□□□□ -0.78
ATG4A-205ENST00000394892 USP26Q9BXU7 913 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 TUT1Q9H6E5 874 aaKnown RBP10.17□□□□□ -0.78
ATG4A-205ENST00000394892 JADE2Q9NQC1 790 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 SETD4Q9NVD3 440 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 RBM28Q9NW13 759 aaKnown RBP10.17□□□□□ -0.78
ATG4A-205ENST00000394892 BARHL2Q9NY43 387 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 PKD2L1Q9P0L9 805 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms