RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PICALMQ13492 652 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 TMC4Q7Z404 712 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 KDM3AQ9Y4C1 1321 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 TTLL1O95922 423 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 GCFC2P16383 781 aaKnown RBP20.79■□□□□ 0.92
CBX1-202ENST00000393408 MARSP56192 900 aaKnown RBP20.79■□□□□ 0.92
CBX1-202ENST00000393408 GLE1Q53GS7 698 aaKnown RBP20.79■□□□□ 0.92
CBX1-202ENST00000393408 TTBK2Q6IQ55 1244 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 C8orf74Q6P047 294 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 TRIM59Q8IWR1 403 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 CAVIN3Q969G5 261 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 NT5C3AQ9H0P0 336 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 BMP2KQ9NSY1 1161 aaPredicted RBP20.79■□□□□ 0.92
CBX1-202ENST00000393408 POLLQ9UGP5 575 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 PCDHA12Q9UN75 941 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 ATP6V0A2Q9Y487 856 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 C10orf71Q711Q0 1435 aa20.79■□□□□ 0.92
CBX1-202ENST00000393408 GNA14O95837 355 aa20.78■□□□□ 0.92
CBX1-202ENST00000393408 MRPL12P52815 198 aaKnown RBP20.78■□□□□ 0.92
CBX1-202ENST00000393408 CFAP221Q4G0U5 840 aa20.78■□□□□ 0.92
CBX1-202ENST00000393408 TBC1D7Q9P0N9 293 aa20.78■□□□□ 0.92
CBX1-202ENST00000393408 RNF14Q9UBS8 474 aa20.78■□□□□ 0.92
CBX1-202ENST00000393408 SSBP05455 408 aaKnown RBP eCLIP20.78■□□□□ 0.92
CBX1-202ENST00000393408 POLR2FP61218 127 aaKnown RBP20.78■□□□□ 0.92
CBX1-202ENST00000393408 NAB2Q15742 525 aa20.78■□□□□ 0.92
CBX1-202ENST00000393408 TSEN2Q8NCE0 465 aaKnown RBP20.78■□□□□ 0.92
CBX1-202ENST00000393408 TBC1D16Q8TBP0 767 aa20.78■□□□□ 0.92
CBX1-202ENST00000393408 MS4A14Q96JA4 679 aa20.78■□□□□ 0.92
CBX1-202ENST00000393408 PLEKHA4Q9H4M7 779 aa20.78■□□□□ 0.92
CBX1-202ENST00000393408 PODXL2Q9NZ53 605 aa20.78■□□□□ 0.92
CBX1-202ENST00000393408 GOLGA8KD6RF30 607 aa20.77■□□□□ 0.92
CBX1-202ENST00000393408 E9PMD0 336 aa20.77■□□□□ 0.92
CBX1-202ENST00000393408 MARCH6O60337 910 aa20.77■□□□□ 0.92
CBX1-202ENST00000393408 NAP1L1P55209 391 aaKnown RBP20.77■□□□□ 0.92
CBX1-202ENST00000393408 CCDC65Q8IXS2 484 aa20.77■□□□□ 0.92
CBX1-202ENST00000393408 LUC7LQ9NQ29 371 aaKnown RBP20.77■□□□□ 0.92
CBX1-202ENST00000393408 ATF5Q9Y2D1 282 aaPredicted RBP20.77■□□□□ 0.92
CBX1-202ENST00000393408 ALS2CLQ60I27 953 aa20.77■□□□□ 0.92
CBX1-202ENST00000393408 NELFCDQ8IXH7 590 aa20.77■□□□□ 0.92
CBX1-202ENST00000393408 ZC3H3Q8IXZ2 948 aaKnown RBP20.77■□□□□ 0.92
CBX1-202ENST00000393408 KCTD10Q9H3F6 313 aa20.77■□□□□ 0.92
CBX1-202ENST00000393408 DDX4Q9NQI0 724 aaKnown RBP20.77■□□□□ 0.92
CBX1-202ENST00000393408 KIAA1024Q9UPX6 916 aa20.77■□□□□ 0.92
CBX1-202ENST00000393408 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.77■□□□□ 0.92
CBX1-202ENST00000393408 MYH4Q9Y623 1939 aa20.77■□□□□ 0.91
CBX1-202ENST00000393408 ZBTB5O15062 677 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 PALMO75781 387 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 PLA2G4BP0C869 781 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 EPB41P11171 864 aaKnown RBP20.76■□□□□ 0.91
CBX1-202ENST00000393408 APBA1Q02410 837 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 SLC18A3Q16572 532 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 FAM196AQ6ZSG2 479 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 SCFD1Q8WVM8 642 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 RBM17Q96I25 401 aaKnown RBP20.76■□□□□ 0.91
CBX1-202ENST00000393408 TRIM34Q9BYJ4 488 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 PSTPIP2Q9H939 334 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 GREB1LQ9C091 1923 aaPredicted RBP20.76■□□□□ 0.91
CBX1-202ENST00000393408 USP17L10C9JJH3 530 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 OPA1O60313 960 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 SLC16A2P36021 539 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 PPFIA1Q13136 1202 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 NNTQ13423 1086 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 TBC1D5Q92609 795 aa20.76■□□□□ 0.91
CBX1-202ENST00000393408 MYO3BQ8WXR4 1341 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 NPHP3-ACAD11A0A0J9YXS1 232 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 KLRC1P26715 233 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 FAM182BQ5T319 152 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 GPATCH4Q5T3I0 446 aaKnown RBP20.75■□□□□ 0.91
CBX1-202ENST00000393408 GPBP1Q86WP2 473 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 NAP1L4Q99733 375 aaKnown RBP20.75■□□□□ 0.91
CBX1-202ENST00000393408 KANSL2Q9H9L4 492 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 SERPINB13Q9UIV8 391 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 PCDHGC5Q9Y5F6 944 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 LTBP1Q14766 1721 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 IRAK1P51617 712 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 GTF2IP78347 998 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 GANQ9H2C0 597 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 GDF3Q9NR23 364 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 AIPL1Q9NZN9 384 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 SWAP70Q9UH65 585 aa20.75■□□□□ 0.91
CBX1-202ENST00000393408 A0A087X0T9 212 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 POTEB3A0JP26 581 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 POTECB2RU33 542 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 BBOX1O75936 387 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 FAM228BP0C875 321 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 CYP11B2P19099 503 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 SHMT1P34896 483 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 CORO7P57737 925 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 CACNB1Q02641 598 aaPredicted RBP20.74■□□□□ 0.91
CBX1-202ENST00000393408 RAPGEF1Q13905 1077 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 HERC4Q5GLZ8 1057 aaPredicted RBP20.74■□□□□ 0.91
CBX1-202ENST00000393408 MEI1Q5TIA1 1274 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 POTEBQ6S5H4 581 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 GBP6Q6ZN66 633 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 IFT20Q8IY31 132 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 SLC26A4O43511 780 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 FTCDO95954 541 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 GLI1P08151 1106 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 KCTD1Q719H9 257 aa20.74■□□□□ 0.91
CBX1-202ENST00000393408 EMILIN3Q9NT22 766 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms