RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 TRIM50Q86XT4 487 aa12.76□□□□□ -0.37
TRAV3-201ENST00000390425 NECAB3Q96P71 396 aaPredicted RBP12.76□□□□□ -0.37
TRAV3-201ENST00000390425 MAP3K14Q99558 947 aa12.76□□□□□ -0.37
TRAV3-201ENST00000390425 OSBPL7Q9BZF2 842 aa12.76□□□□□ -0.37
TRAV3-201ENST00000390425 LSG1Q9H089 658 aaKnown RBP12.76□□□□□ -0.37
TRAV3-201ENST00000390425 MLXIPQ9HAP2 919 aa12.76□□□□□ -0.37
TRAV3-201ENST00000390425 ABHD14A-ACY1A0A1B0GW23 586 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 SPATA31C2B4DYI2 1134 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 KIF28PB7ZC32 967 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 H3BRB1 525 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 SH2B2O14492 632 aaPredicted RBP12.75□□□□□ -0.37
TRAV3-201ENST00000390425 MEIS2O14770 477 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
TRAV3-201ENST00000390425 SMIM10L2AP0DMW4 78 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 SMIM10L2BP0DMW5 78 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 RXRAP19793 462 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 KCNQ1P51787 676 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 COL4A6Q14031 1691 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 GNPTABQ3T906 1256 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 WDR81Q562E7 1941 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 METTL7BQ6UX53 244 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 GPR20Q99678 358 aa12.75□□□□□ -0.37
TRAV3-201ENST00000390425 TUT1Q9H6E5 874 aaKnown RBP12.75□□□□□ -0.37
TRAV3-201ENST00000390425 KIAA1671Q9BY89 1806 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 PIK3CDO00329 1044 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 SLC27A2O14975 620 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 TREHO43280 583 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 FIBPO43427 364 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 PRC1O43663 620 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 LGR5O75473 907 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 STAM2O75886 525 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 BMP1P13497 986 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 PLEKHG4Q58EX7 1191 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAV3-201ENST00000390425 CYFIP1Q7L576 1253 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 RAB11FIP4Q86YS3 637 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 CMTR1Q8N1G2 835 aaKnown RBP12.74□□□□□ -0.37
TRAV3-201ENST00000390425 SRBD1Q8N5C6 995 aaKnown RBP12.74□□□□□ -0.37
TRAV3-201ENST00000390425 DBF4BQ8NFT6 615 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 CTCFLQ8NI51 663 aaPredicted RBP12.74□□□□□ -0.37
TRAV3-201ENST00000390425 GDPD5Q8WTR4 605 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 UHRF1Q96T88 793 aaPredicted RBP12.74□□□□□ -0.37
TRAV3-201ENST00000390425 MTA3Q9BTC8 594 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 RNPEPQ9H4A4 650 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 RTEL1Q9NZ71 1219 aa12.74□□□□□ -0.37
TRAV3-201ENST00000390425 TTC3P53804 2025 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 C17orf102A2RUQ5 167 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 LINC01553A4QN01 128 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 RSPH10B2B2RC85 870 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 NOP56O00567 594 aaKnown RBP12.73□□□□□ -0.37
TRAV3-201ENST00000390425 RSPH10BP0C881 870 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 SMARCA1P28370 1054 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 THPOP40225 353 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 ERVK-21P61565 698 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 ADAM17P78536 824 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 IKBKEQ14164 716 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 NEDD9Q14511 834 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 PCNX4Q63HM2 1172 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 FAM117BQ6P1L5 589 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 SKAP1Q86WV1 359 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 ATP6V0A1Q93050 837 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 RRP36Q96EU6 259 aaKnown RBP12.73□□□□□ -0.37
TRAV3-201ENST00000390425 ESYT1Q9BSJ8 1104 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 MTUS1Q9ULD2 1270 aa12.73□□□□□ -0.37
TRAV3-201ENST00000390425 EMSYQ7Z589 1322 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 EFCAB14O75071 495 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 ATP9AO75110 1047 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 CTSHP09668 335 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 KIF5BP33176 963 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 MCM5P33992 734 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 NECTIN1Q15223 517 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 SKIV2LQ15477 1246 aaKnown RBP12.72□□□□□ -0.37
TRAV3-201ENST00000390425 CREB3L3Q68CJ9 461 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 SMARCC2Q8TAQ2 1214 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 LMBR1Q8WVP7 490 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 TMEM87BQ96K49 555 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 RAD9AQ99638 391 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 SENP7Q9BQF6 1050 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 ZBED2Q9BTP6 218 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 USP26Q9BXU7 913 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 LRRC2Q9BYS8 371 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
TRAV3-201ENST00000390425 SUGCTQ9HAC7 445 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 SETD4Q9NVD3 440 aa12.72□□□□□ -0.37
TRAV3-201ENST00000390425 EVPLQ92817 2033 aa12.71□□□□□ -0.37
TRAV3-201ENST00000390425 KCNA2P16389 499 aa12.71□□□□□ -0.37
TRAV3-201ENST00000390425 LIFRP42702 1097 aa12.71□□□□□ -0.37
TRAV3-201ENST00000390425 HTRA4P83105 476 aaPredicted RBP12.71□□□□□ -0.37
TRAV3-201ENST00000390425 SP4Q02446 784 aa12.71□□□□□ -0.37
TRAV3-201ENST00000390425 UBE2SQ16763 222 aa12.71□□□□□ -0.37
TRAV3-201ENST00000390425 UTP14CQ5TAP6 766 aaKnown RBP12.71□□□□□ -0.37
TRAV3-201ENST00000390425 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.37
TRAV3-201ENST00000390425 CUL5Q93034 780 aa12.71□□□□□ -0.37
TRAV3-201ENST00000390425 TGS1Q96RS0 853 aaKnown RBP12.71□□□□□ -0.37
TRAV3-201ENST00000390425 LZTS2Q9BRK4 669 aa12.71□□□□□ -0.37
TRAV3-201ENST00000390425 SEC63Q9UGP8 760 aaKnown RBP12.71□□□□□ -0.37
TRAV3-201ENST00000390425 CNTNAP5Q8WYK1 1306 aa12.7□□□□□ -0.38
TRAV3-201ENST00000390425 CCDC69A6NI79 296 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms