RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 APLFQ8IW19 511 aaPredicted RBP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 GIPC2Q8TF65 315 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 BPIFA3Q9BQP9 254 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 FAM96AQ9H5X1 160 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 HNRNPCL1O60812 293 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 COBLO75128 1261 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 PDIA3P30101 505 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 CNGA3Q16281 694 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 RFX6Q8HWS3 928 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 ZSCAN10Q96SZ4 725 aaPredicted RBP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 CHCHD3Q9NX63 227 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 STX18Q9P2W9 335 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 FOXO3O43524 673 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 KRT14P02533 472 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 PMS1P54277 932 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 TEKT2Q9UIF3 430 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 MID2Q9UJV3 735 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 COL4A3BPQ9Y5P4 624 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 KIAA0556O60303 1618 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 KIAA1210Q9ULL0 1709 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 AFPP02771 609 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 MFAP3P55082 362 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 PTK2Q05397 1052 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 FAM133AQ8N9E0 248 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 NFATC2IPQ8NCF5 419 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 ZNF653Q96CK0 615 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 IL17RAQ96F46 866 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 ANGPTL3Q9Y5C1 460 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 K7ENM7 598 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 ARHGDIAP52565 204 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 PDXDC1Q6P996 788 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 PYROXD1Q8WU10 500 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 GRAMD1AQ96CP6 724 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 EEF2KMTQ96G04 330 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 SAMSN1Q9NSI8 373 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 DDX25Q9UHL0 483 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 PLCH2O75038 1416 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 GAS7O60861 476 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 ITGA6P23229 1130 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 OLFML2BQ68BL8 750 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 PCGF5Q86SE9 256 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 LSG1Q9H089 658 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 GCNT4Q9P109 453 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 PRDM1O75626 825 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 CCDC15Q0P6D6 951 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 CADPS2Q86UW7 1296 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 SOS2Q07890 1332 aaPredicted RBP13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 TMPRSS15P98073 1019 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 CYLC2Q14093 348 aaPredicted RBP13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 AATFQ9NY61 560 aaKnown RBP eCLIP13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 NDUFB9Q9Y6M9 179 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 HOXB7P09629 217 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 AP1B1Q10567 949 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 AOC3Q16853 763 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 GJC2Q5T442 439 aaPredicted RBP13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 PPP1R2P3Q6NXS1 205 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 FAM186BQ8IYM0 893 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 TLK1Q9UKI8 766 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 A0A1W2PP64 1363 aa13.37□□□□□ -0.27
SRGAP3-202ENST00000383836 BTBD18B2RXH4 712 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 HNRNPCL2B2RXH8 293 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 KRT8P05787 483 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 PIK3CAP42336 1068 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 CRYMQ14894 314 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 CEP55Q53EZ4 464 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 LZTS1Q9Y250 596 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 RAPGEF3O95398 923 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 SLC1A4P43007 532 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 MKRN3Q13064 507 aaKnown RBP13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 AK8Q96MA6 479 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 FAM161BQ96MY7 647 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 FAM26FQ5R3K3 315 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 FAM47EQ6ZV65 393 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 KCNA3P22001 575 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 NR2F2P24468 414 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 DMP1Q13316 513 aaPredicted RBP13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 USH1GQ495M9 461 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 CFAP36Q96G28 342 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 ABHD10Q9NUJ1 306 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 ITSN1Q15811 1721 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 NVLO15381 856 aaKnown RBP13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 EIF6P56537 245 aaKnown RBP13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 RASSF3Q86WH2 238 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 COG1Q8WTW3 980 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 HAUS5O94927 633 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 CCND1P24385 295 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 MRPL28Q13084 256 aaKnown RBP13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 RCOR1Q9UKL0 485 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 ARHGAP26Q9UNA1 814 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 CHD4Q14839 1912 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 A0A087WWV3 80 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 EIF3HO15372 352 aaKnown RBP eCLIP13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 FGGP02679 453 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 OCRLQ01968 901 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 CAV1Q03135 178 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 SPATA5Q8NB90 893 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms