RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 RTEL1Q9NZ71 1219 aa26.72■■□□□ 1.87
U2AF1-202ENST00000380276 XIRP2A4UGR9 3374 aa26.71■■□□□ 1.87
U2AF1-202ENST00000380276 PTH1RQ03431 593 aa26.71■■□□□ 1.87
U2AF1-202ENST00000380276 CATIPQ7Z7H3 387 aa26.71■■□□□ 1.87
U2AF1-202ENST00000380276 FBXO22Q8NEZ5 403 aa26.71■■□□□ 1.87
U2AF1-202ENST00000380276 NCOA7Q8NI08 942 aa26.71■■□□□ 1.87
U2AF1-202ENST00000380276 C17orf80Q9BSJ5 609 aa26.71■■□□□ 1.87
U2AF1-202ENST00000380276 BCAS3Q9H6U6 928 aa26.71■■□□□ 1.87
U2AF1-202ENST00000380276 INSL6Q9Y581 213 aa26.71■■□□□ 1.87
U2AF1-202ENST00000380276 SIP14410 1827 aa26.71■■□□□ 1.87
U2AF1-202ENST00000380276 TREHO43280 583 aa26.7■■□□□ 1.86
U2AF1-202ENST00000380276 CYTH3O43739 400 aa26.7■■□□□ 1.86
U2AF1-202ENST00000380276 PDE4AP27815 886 aa26.7■■□□□ 1.86
U2AF1-202ENST00000380276 SP4Q02446 784 aa26.7■■□□□ 1.86
U2AF1-202ENST00000380276 UTP14CQ5TAP6 766 aaKnown RBP26.7■■□□□ 1.86
U2AF1-202ENST00000380276 CYFIP1Q7L576 1253 aa26.7■■□□□ 1.86
U2AF1-202ENST00000380276 TRANK1O15050 2925 aa26.7■■□□□ 1.86
U2AF1-202ENST00000380276 NEDD9Q14511 834 aa26.69■■□□□ 1.86
U2AF1-202ENST00000380276 SMARCC2Q8TAQ2 1214 aa26.69■■□□□ 1.86
U2AF1-202ENST00000380276 SEPT8Q92599 483 aa26.69■■□□□ 1.86
U2AF1-202ENST00000380276 E7EWF7 191 aa26.68■■□□□ 1.86
U2AF1-202ENST00000380276 UPP2O95045 317 aa26.68■■□□□ 1.86
U2AF1-202ENST00000380276 MRPS9P82933 396 aaKnown RBP26.68■■□□□ 1.86
U2AF1-202ENST00000380276 CUL5Q93034 780 aa26.68■■□□□ 1.86
U2AF1-202ENST00000380276 YME1L1Q96TA2 773 aa26.68■■□□□ 1.86
U2AF1-202ENST00000380276 RNPEPQ9H4A4 650 aa26.68■■□□□ 1.86
U2AF1-202ENST00000380276 EPHX3Q9H6B9 360 aa26.68■■□□□ 1.86
U2AF1-202ENST00000380276 UBE2ZQ9H832 354 aaPredicted RBP26.68■■□□□ 1.86
U2AF1-202ENST00000380276 BAZ2BQ9UIF8 2168 aaKnown RBP26.68■■□□□ 1.86
U2AF1-202ENST00000380276 MICAL3Q7RTP6 2002 aa26.67■■□□□ 1.86
U2AF1-202ENST00000380276 FIBPO43427 364 aa26.67■■□□□ 1.86
U2AF1-202ENST00000380276 GNAT1P11488 350 aa26.67■■□□□ 1.86
U2AF1-202ENST00000380276 TROAPQ12815 778 aa26.67■■□□□ 1.86
U2AF1-202ENST00000380276 PLEKHG4Q58EX7 1191 aa26.67■■□□□ 1.86
U2AF1-202ENST00000380276 METTL7BQ6UX53 244 aa26.67■■□□□ 1.86
U2AF1-202ENST00000380276 TRIM50Q86XT4 487 aa26.67■■□□□ 1.86
U2AF1-202ENST00000380276 USP26Q9BXU7 913 aa26.67■■□□□ 1.86
U2AF1-202ENST00000380276 SETD4Q9NVD3 440 aa26.67■■□□□ 1.86
U2AF1-202ENST00000380276 ZNF215Q9UL58 517 aaPredicted RBP26.67■■□□□ 1.86
U2AF1-202ENST00000380276 TAF6LQ9Y6J9 622 aa26.67■■□□□ 1.86
U2AF1-202ENST00000380276 DOCK5Q9H7D0 1870 aa26.66■■□□□ 1.86
U2AF1-202ENST00000380276 STAM2O75886 525 aa26.66■■□□□ 1.86
U2AF1-202ENST00000380276 CHMLP26374 656 aa26.66■■□□□ 1.86
U2AF1-202ENST00000380276 CTCFLQ8NI51 663 aaPredicted RBP26.66■■□□□ 1.86
U2AF1-202ENST00000380276 FAM122AQ96E09 287 aa26.66■■□□□ 1.86
U2AF1-202ENST00000380276 GPR20Q99678 358 aa26.66■■□□□ 1.86
U2AF1-202ENST00000380276 ICAM3P32942 547 aa26.65■■□□□ 1.86
U2AF1-202ENST00000380276 ARHGAP4P98171 946 aa26.65■■□□□ 1.86
U2AF1-202ENST00000380276 RRP36Q96EU6 259 aaKnown RBP26.65■■□□□ 1.86
U2AF1-202ENST00000380276 INPP4AQ96PE3 977 aaPredicted RBP26.65■■□□□ 1.86
U2AF1-202ENST00000380276 MYL10Q9BUA6 226 aa26.65■■□□□ 1.86
U2AF1-202ENST00000380276 SEC63Q9UGP8 760 aaKnown RBP26.65■■□□□ 1.86
U2AF1-202ENST00000380276 SPATA31C2B4DYI2 1134 aa26.64■■□□□ 1.86
U2AF1-202ENST00000380276 KCNA5P22460 613 aa26.64■■□□□ 1.86
U2AF1-202ENST00000380276 SEMA3FQ13275 785 aa26.64■■□□□ 1.86
U2AF1-202ENST00000380276 FRMPD4Q14CM0 1322 aa26.64■■□□□ 1.85
U2AF1-202ENST00000380276 HTRA4P83105 476 aaPredicted RBP26.63■■□□□ 1.85
U2AF1-202ENST00000380276 PTPROQ16827 1216 aa26.63■■□□□ 1.85
U2AF1-202ENST00000380276 USP17L6PQ6QN14 398 aa26.63■■□□□ 1.85
U2AF1-202ENST00000380276 NLRX1Q86UT6 975 aa26.63■■□□□ 1.85
U2AF1-202ENST00000380276 CAND2O75155 1236 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 HOXC8P31273 242 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 ANTXR2P58335 489 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 EPC2Q52LR7 807 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 TMEM31Q5JXX7 168 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 CASC1Q6TDU7 716 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 NFXL1Q6ZNB6 911 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 EP400NLQ6ZTU2 488 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 ZNF654Q8IZM8 581 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 SAMD11Q96NU1 681 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 IFIH1Q9BYX4 1025 aaKnown RBP26.62■■□□□ 1.85
U2AF1-202ENST00000380276 OSBPL7Q9BZF2 842 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 TELO2Q9Y4R8 837 aa26.62■■□□□ 1.85
U2AF1-202ENST00000380276 KIF5BP33176 963 aa26.61■■□□□ 1.85
U2AF1-202ENST00000380276 PLA2G5P39877 138 aa26.61■■□□□ 1.85
U2AF1-202ENST00000380276 MKRN4PQ13434 485 aaPredicted RBP26.61■■□□□ 1.85
U2AF1-202ENST00000380276 GPM6BQ13491 265 aa26.61■■□□□ 1.85
U2AF1-202ENST00000380276 SP7Q8TDD2 431 aaPredicted RBP26.61■■□□□ 1.85
U2AF1-202ENST00000380276 LRFN3Q9BTN0 628 aa26.61■■□□□ 1.85
U2AF1-202ENST00000380276 PCNX4Q63HM2 1172 aa26.6■■□□□ 1.85
U2AF1-202ENST00000380276 MB21D2Q8IYB1 491 aaPredicted RBP26.6■■□□□ 1.85
U2AF1-202ENST00000380276 IGDCC4Q8TDY8 1250 aa26.6■■□□□ 1.85
U2AF1-202ENST00000380276 LMBR1Q8WVP7 490 aa26.6■■□□□ 1.85
U2AF1-202ENST00000380276 TOP1MTQ969P6 601 aa26.6■■□□□ 1.85
U2AF1-202ENST00000380276 MRPL38Q96DV4 380 aaKnown RBP26.6■■□□□ 1.85
U2AF1-202ENST00000380276 SPZ1Q9BXG8 430 aa26.6■■□□□ 1.85
U2AF1-202ENST00000380276 HCN4Q9Y3Q4 1203 aa26.6■■□□□ 1.85
U2AF1-202ENST00000380276 NCOR1O75376 2440 aa26.59■■□□□ 1.85
U2AF1-202ENST00000380276 FAM86C2PA6NEL3 165 aa26.59■■□□□ 1.85
U2AF1-202ENST00000380276 SGSM2O43147 1006 aa26.59■■□□□ 1.85
U2AF1-202ENST00000380276 DDAH1O94760 285 aa26.59■■□□□ 1.85
U2AF1-202ENST00000380276 TIGD5Q53EQ6 642 aa26.59■■□□□ 1.85
U2AF1-202ENST00000380276 APBB2Q92870 758 aa26.59■■□□□ 1.85
U2AF1-202ENST00000380276 KHSRPQ92945 711 aaKnown RBP eCLIP26.59■■□□□ 1.85
U2AF1-202ENST00000380276 PKD2L1Q9P0L9 805 aa26.59■■□□□ 1.85
U2AF1-202ENST00000380276 SUPT16HQ9Y5B9 1047 aaKnown RBP26.59■■□□□ 1.85
U2AF1-202ENST00000380276 RBM8AQ9Y5S9 174 aaKnown RBP26.59■■□□□ 1.85
U2AF1-202ENST00000380276 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.58■■□□□ 1.85
U2AF1-202ENST00000380276 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.58■■□□□ 1.85
U2AF1-202ENST00000380276 CCDC69A6NI79 296 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms