RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 IFNAR2P48551 515 aa12.71□□□□□ -0.38
SEC23B-204ENST00000377475 ACTN3Q08043 901 aaPredicted RBP12.71□□□□□ -0.38
SEC23B-204ENST00000377475 DHX9Q08211 1270 aaKnown RBP12.71□□□□□ -0.38
SEC23B-204ENST00000377475 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.38
SEC23B-204ENST00000377475 KRT71Q3SY84 523 aa12.71□□□□□ -0.38
SEC23B-204ENST00000377475 PLAAQ9Y263 795 aa12.71□□□□□ -0.38
SEC23B-204ENST00000377475 ADAMTSL3P82987 1691 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 KRIT1O00522 736 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 CYP2J2P51589 502 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 E2F5Q15329 346 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 PEX26Q7Z412 305 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 ZNF804AQ7Z570 1209 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 ELOA2Q8IYF1 753 aaPredicted RBP12.7□□□□□ -0.38
SEC23B-204ENST00000377475 FNBP4Q8N3X1 1017 aaPredicted RBP12.7□□□□□ -0.38
SEC23B-204ENST00000377475 RETREG2Q8NC44 543 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 CCDC114Q96M63 670 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 JPH2Q9BR39 696 aaPredicted RBP12.7□□□□□ -0.38
SEC23B-204ENST00000377475 ANKRD2Q9GZV1 360 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 PSTPIP2Q9H939 334 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 ATP8A1Q9Y2Q0 1164 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 RDXP35241 583 aaKnown RBP12.7□□□□□ -0.38
SEC23B-204ENST00000377475 CDR1P51861 262 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 COASYQ13057 564 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 HAUS3Q68CZ6 603 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 CPLX4Q7Z7G2 160 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 CNBD1Q8NA66 436 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 TLR10Q9BXR5 811 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 MLXIPLQ9NP71 852 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 COL4A3BPQ9Y5P4 624 aa12.7□□□□□ -0.38
SEC23B-204ENST00000377475 UBAP1LF5GYI3 381 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 EPHB4P54760 987 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 ECM1Q16610 540 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 MRRFQ96E11 262 aaKnown RBP12.69□□□□□ -0.38
SEC23B-204ENST00000377475 CCSER1Q9C0I3 900 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 PLAGL2Q9UPG8 496 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 BAZ2AQ9UIF9 1905 aaKnown RBP12.69□□□□□ -0.38
SEC23B-204ENST00000377475 CETN3O15182 167 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 RAD51CO43502 376 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 VPS41P49754 854 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 TUBB4BP68371 445 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 FKBP3Q00688 224 aaKnown RBP12.69□□□□□ -0.38
SEC23B-204ENST00000377475 PAK2Q13177 524 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 TTMPQ5BVD1 217 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 WDR66Q8TBY9 1149 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 NOVA2Q9UNW9 492 aaKnown RBP12.69□□□□□ -0.38
SEC23B-204ENST00000377475 NR1D1P20393 614 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 KCNB1Q14721 858 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 CT47A1Q5JQC4 288 aaPredicted RBP12.69□□□□□ -0.38
SEC23B-204ENST00000377475 RPGRIP1Q96KN7 1286 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 MMTAG2Q9BU76 263 aaKnown RBP12.69□□□□□ -0.38
SEC23B-204ENST00000377475 EMILIN3Q9NT22 766 aa12.69□□□□□ -0.38
SEC23B-204ENST00000377475 DAPK3O43293 454 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 GDF11O95390 407 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 GJC1P36383 396 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 IRX3P78415 501 aaPredicted RBP12.68□□□□□ -0.38
SEC23B-204ENST00000377475 KCNH2Q12809 1159 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 KIAA0825Q8IV33 1275 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 TPH2Q8IWU9 490 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 CCDC65Q8IXS2 484 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 BLOC1S4Q9NUP1 217 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 PSD3Q9NYI0 1048 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 PCDHA1Q9Y5I3 950 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 EIF4E1BA6NMX2 242 aaKnown RBP12.68□□□□□ -0.38
SEC23B-204ENST00000377475 PLA2G4BP0C869 781 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 ITGA4P13612 1032 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 SSR1P43307 286 aaKnown RBP12.68□□□□□ -0.38
SEC23B-204ENST00000377475 ICE2Q659A1 982 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 UNC13DQ70J99 1090 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 PTPN22Q9Y2R2 807 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 LOC102724159A0A0B4J2E5 919 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 RSPH10B2B2RC85 870 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 RSPH10BP0C881 870 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 PWP2Q15269 919 aaKnown RBP12.68□□□□□ -0.38
SEC23B-204ENST00000377475 KLHDC7AQ5VTJ3 777 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 PDXDC1Q6P996 788 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 MDM1Q8TC05 714 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 CASKIN2Q8WXE0 1202 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 PNMA5Q96PV4 448 aa12.68□□□□□ -0.38
SEC23B-204ENST00000377475 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.68□□□□□ -0.38
SEC23B-204ENST00000377475 TBCAO75347 108 aaKnown RBP12.67□□□□□ -0.38
SEC23B-204ENST00000377475 RCAN1P53805 252 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 CORO7P57737 925 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 TNNC1P63316 161 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 HDLBPQ00341 1268 aaKnown RBP12.67□□□□□ -0.38
SEC23B-204ENST00000377475 ZNF746Q6NUN9 644 aaPredicted RBP12.67□□□□□ -0.38
SEC23B-204ENST00000377475 SYCP3Q8IZU3 236 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 CTNNBL1Q8WYA6 563 aaPredicted RBP12.67□□□□□ -0.38
SEC23B-204ENST00000377475 CABS1Q96KC9 395 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 TRIM51Q9BSJ1 452 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 ARMCX3Q9UH62 379 aaPredicted RBP12.67□□□□□ -0.38
SEC23B-204ENST00000377475 SCAF8Q9UPN6 1271 aaKnown RBP12.67□□□□□ -0.38
SEC23B-204ENST00000377475 COL1A1P02452 1464 aaPredicted RBP12.67□□□□□ -0.38
SEC23B-204ENST00000377475 GCOM1H8Y6P7 765 aaPredicted RBP12.67□□□□□ -0.38
SEC23B-204ENST00000377475 MYZAPP0CAP1 466 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 PSMC6P62333 389 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 GSTO1P78417 241 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 KCNA1Q09470 495 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 KIRREL3Q8IZU9 778 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 DYDC1Q8WWB3 177 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms