RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 UFL1O94874 794 aa15.26■□□□□ 0.03
SF1-205ENST00000377394 SSBP05455 408 aaKnown RBP eCLIP15.26■□□□□ 0.03
SF1-205ENST00000377394 PRLRP16471 622 aa15.26■□□□□ 0.03
SF1-205ENST00000377394 GUCY1A3Q02108 690 aa15.26■□□□□ 0.03
SF1-205ENST00000377394 APBA1Q02410 837 aa15.26■□□□□ 0.03
SF1-205ENST00000377394 TMEM266Q2M3C6 531 aa15.26■□□□□ 0.03
SF1-205ENST00000377394 NAIF1Q69YI7 327 aaPredicted RBP15.26■□□□□ 0.03
SF1-205ENST00000377394 MMGT1Q8N4V1 131 aa15.26■□□□□ 0.03
SF1-205ENST00000377394 CNBD1Q8NA66 436 aa15.26■□□□□ 0.03
SF1-205ENST00000377394 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
SF1-205ENST00000377394 MTMR4Q9NYA4 1195 aa15.26■□□□□ 0.03
SF1-205ENST00000377394 PLIN4Q96Q06 1357 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 MOCS3O95396 460 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 SNHG28P0DPA3 235 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 SEC24CP53992 1094 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 ECM1Q16610 540 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 ASTE1Q2TB18 679 aaPredicted RBP15.25■□□□□ 0.03
SF1-205ENST00000377394 DDX12PQ92771 950 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 FGFR1OPO95684 399 aaKnown RBP15.25■□□□□ 0.03
SF1-205ENST00000377394 RFC4P35249 363 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 ITIH3Q06033 890 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 LRRC41Q15345 812 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 MFSD14BQ5SR56 506 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 FOXR2Q6PJQ5 311 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 RRAGAQ7L523 313 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 EGFL6Q8IUX8 553 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 CCDC13Q8IYE1 715 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 SNX29Q8TEQ0 813 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 LRRC1Q9BTT6 524 aa15.25■□□□□ 0.03
SF1-205ENST00000377394 GOLGA8KD6RF30 607 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 PJA2O43164 708 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 MATR3P43243 847 aaKnown RBP eCLIP15.24■□□□□ 0.03
SF1-205ENST00000377394 NAP1L1P55209 391 aaKnown RBP15.24■□□□□ 0.03
SF1-205ENST00000377394 CCDC40Q4G0X9 1142 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 NAA35Q5VZE5 725 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 IQCEQ6IPM2 695 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 LRRC47Q8N1G4 583 aaKnown RBP15.24■□□□□ 0.03
SF1-205ENST00000377394 SALL4Q9UJQ4 1053 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 NHSQ6T4R5 1651 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 IGKV6D-41A0A0C4DH26 115 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 KRT14P02533 472 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 ATP2B4P23634 1241 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 SKOR1P84550 965 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 KCNMA1Q12791 1236 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 IFT88Q13099 833 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 PSMD2Q13200 908 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 SF3B2Q13435 895 aaKnown RBP15.24■□□□□ 0.03
SF1-205ENST00000377394 VPS72Q15906 364 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 ASPRV1Q53RT3 343 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 KRT79Q5XKE5 535 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 PRR5LQ6MZQ0 368 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 PDXDC1Q6P996 788 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 DNAJC19Q96DA6 116 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 SGSM3Q96HU1 749 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 RNPC3Q96LT9 517 aaKnown RBP15.24■□□□□ 0.03
SF1-205ENST00000377394 RAB34Q9BZG1 259 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 SLC40A1Q9NP59 571 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 SMARCAL1Q9NZC9 954 aa15.24■□□□□ 0.03
SF1-205ENST00000377394 DDX20Q9UHI6 824 aaKnown RBP15.24■□□□□ 0.03
SF1-205ENST00000377394 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.24■□□□□ 0.03
SF1-205ENST00000377394 PPP1R12AO14974 1030 aaPredicted RBP15.23■□□□□ 0.03
SF1-205ENST00000377394 AKR1B10O60218 316 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 RASSF9O75901 435 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 GABPAQ06546 454 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 ZCWPW2Q504Y3 356 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 CEP85LQ5SZL2 805 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 TRAPPC3LQ5T215 181 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 HGSNATQ68CP4 663 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 PPP4R3AQ6IN85 833 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 GPIHBP1Q8IV16 184 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 CCDC155Q8N6L0 562 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 OSBPL9Q96SU4 736 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 RIC8AQ9NPQ8 531 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 GGA1Q9UJY5 639 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 PPP1R11O60927 126 aaPredicted RBP15.23■□□□□ 0.03
SF1-205ENST00000377394 AKR1B1P15121 316 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 ERCC3P19447 782 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 HOXA7P31268 230 aaPredicted RBP15.23■□□□□ 0.03
SF1-205ENST00000377394 LSP1P33241 339 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 SPATA4Q8NEY3 305 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 HAS1Q92839 578 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 JMJD4Q9H9V9 463 aa15.23■□□□□ 0.03
SF1-205ENST00000377394 SKAP2O75563 359 aaPredicted RBP15.22■□□□□ 0.03
SF1-205ENST00000377394 GCFC2P16383 781 aaKnown RBP15.22■□□□□ 0.03
SF1-205ENST00000377394 CLK2P49760 499 aaKnown RBP15.22■□□□□ 0.03
SF1-205ENST00000377394 HDLBPQ00341 1268 aaKnown RBP15.22■□□□□ 0.03
SF1-205ENST00000377394 E2F5Q15329 346 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 CRY2Q49AN0 593 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 NFRKBQ6P4R8 1299 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 FAM228AQ86W67 206 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 CLEC10AQ8IUN9 316 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 RPGRQ92834 1020 aaKnown RBP15.22■□□□□ 0.03
SF1-205ENST00000377394 EDEM3Q9BZQ6 932 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 VCPKMTQ9H867 229 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 GPCPD1Q9NPB8 672 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 MAGEA1P43355 309 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 TNNI2P48788 182 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 SMTNP53814 917 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 UBE2SQ16763 222 aa15.22■□□□□ 0.03
SF1-205ENST00000377394 SPRED3Q2MJR0 410 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms