RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 GOLGA6DP0CG33 693 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 KLRC1P26715 233 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 NAP1L1P55209 391 aaKnown RBP13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 GTF2IP78347 998 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 PPARDQ03181 441 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 KCTD1Q719H9 257 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 CERS3Q8IU89 383 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 ZNF713Q8N859 430 aaPredicted RBP13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 TBC1D16Q8TBP0 767 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 ARL8AQ96BM9 186 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 NOX5Q96PH1 765 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 TSG101Q99816 390 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 LSM14BQ9BX40 385 aaKnown RBP13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 PACSIN1Q9BY11 444 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 RASSF4Q9H2L5 321 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 GOLGA6AQ9NYA3 693 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 PCDHA12Q9UN75 941 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 PACSIN2Q9UNF0 486 aaPredicted RBP13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 KIAA1024Q9UPX6 916 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 FAM196BA6NMK8 535 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L15C9J2P7 530 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L13C9JLJ4 530 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L11C9JVI0 530 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L18D6R9N7 530 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L22D6RA61 530 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L17D6RBQ6 530 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L19D6RCP7 530 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L20D6RJB6 530 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 PALMO75781 387 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 FTCDO95954 541 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 TAL1P17542 331 aaPredicted RBP13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 ATP2B4P23634 1241 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L24Q0WX57 530 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 PTPROQ16827 1216 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 CRY2Q49AN0 593 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 CCDC40Q4G0X9 1142 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 CCDC181Q5TID7 509 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 USP17L6PQ6QN14 398 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 PROM2Q8N271 834 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 FAM76AQ8TAV0 307 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 SCFD1Q8WVM8 642 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 TBC1D5Q92609 795 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 CEP72Q9P209 647 aa13.69□□□□□ -0.22
TNFSF13B-201ENST00000375887 A0A087X0T9 212 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 ESYT3A0FGR9 886 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 POTECB2RU33 542 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 SHOX2O60902 331 aaPredicted RBP13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 PPFIA4O75335 1185 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 FAM228BP0C875 321 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 RNASE9P60153 205 aaKnown RBP13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 SNAP25P60880 206 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 TRADDQ15628 312 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 SFMBT2Q5VUG0 894 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 CCDC70Q6NSX1 233 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 TRIM59Q8IWR1 403 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 SH3GL2Q99962 352 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 EDEM3Q9BZQ6 932 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 MYH7BA7E2Y1 1941 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 PLIN4Q96Q06 1357 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 FAM153BP0C7A2 387 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 STAT3P40763 770 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 CARSP49589 748 aaKnown RBP13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 IRAK1P51617 712 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 FAM153CQ494X1 144 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 SLC9C1Q4G0N8 1177 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 TTC19Q6DKK2 380 aaPredicted RBP13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 RNF10Q8N5U6 811 aaKnown RBP13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 KCTD10Q9H3F6 313 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 PSTPIP2Q9H939 334 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 ADAMTS1Q9UHI8 967 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 FAM153AQ9UHL3 310 aa13.68□□□□□ -0.22
TNFSF13B-201ENST00000375887 TTLL1O95922 423 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 SERPING1P05155 500 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 PLA2G4BP0C869 781 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 PAFAH1B1P43034 410 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 SCNN1DP51172 638 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 TTMPQ5BVD1 217 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 ARSHQ5FYA8 562 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 HERC4Q5GLZ8 1057 aaPredicted RBP13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 CERS5Q8N5B7 392 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 LRRC4BQ9NT99 713 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 MARCH6O60337 910 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 SHMT1P34896 483 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 CASP5P51878 434 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 NAB2Q15742 525 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 DNAJC21Q5F1R6 531 aaKnown RBP13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 HYIQ5T013 277 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 C8orf74Q6P047 294 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 FOXR2Q6PJQ5 311 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 FAM133AQ8N9E0 248 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 CUL5Q93034 780 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 ZHX3Q9H4I2 956 aa13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.67□□□□□ -0.22
TNFSF13B-201ENST00000375887 BTAF1O14981 1849 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 MPHOSPH10O00566 681 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms