RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 PCDHA6Q9UN73 950 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 PCDHA8Q9Y5H6 950 aa12.64□□□□□ -0.39
EXOSC1-202ENST00000370885 TMEM265A0A087WTH1 108 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 STXBP3O00186 592 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 FIBPO43427 364 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 CKBP12277 381 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 KCNA2P16389 499 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 RBL2Q08999 1139 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 ADGRE1Q14246 886 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 C8orf34Q49A92 452 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 METTL7BQ6UX53 244 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 SPRED2Q7Z698 418 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 TMCO2Q7Z6W1 182 aaPredicted RBP12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 RPUSD2Q8IZ73 545 aaKnown RBP12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 C7orf31Q8N865 590 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 USP38Q8NB14 1042 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 JAKMIP1Q96N16 626 aaKnown RBP12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 TMEM260Q9NX78 707 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 UBIAD1Q9Y5Z9 338 aa12.63□□□□□ -0.39
EXOSC1-202ENST00000370885 GSTTP1A0A1W2PQM5 241 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 GOLGA8AA7E2F4 631 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 GOLGA8BA8MQT2 603 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 ZBBXA8MT70 800 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 H3BRB1 525 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 TREHO43280 583 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 PPFIA3O75145 1194 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 STAM2O75886 525 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 SP4Q02446 784 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 BFSP2Q13515 415 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 KRT32Q14532 448 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 PKN1Q16512 942 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 ZNF618Q5T7W0 954 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 LRRC8DQ7L1W4 858 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 RETREG2Q8NC44 543 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 BRF1Q92994 677 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 CUL5Q93034 780 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 AGXT2Q9BYV1 514 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 RNPEPQ9H4A4 650 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 PRDM12Q9H4Q4 367 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 TUT1Q9H6E5 874 aaKnown RBP12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 PKD2L1Q9P0L9 805 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 SLC4A7Q9Y6M7 1214 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 XIRP2A4UGR9 3374 aa12.62□□□□□ -0.39
EXOSC1-202ENST00000370885 CXCL10P02778 98 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 SMIM10L2AP0DMW4 78 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 SMIM10L2BP0DMW5 78 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 FOSL2P15408 326 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 SELPP16109 830 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 ATP2A2P16615 1042 aaKnown RBP12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 RFC2P35250 354 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 CLK2P49760 499 aaKnown RBP12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 ADAM17P78536 824 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 PTK7Q13308 1070 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 NEDD9Q14511 834 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 NTRK3Q16288 839 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 GNPTABQ3T906 1256 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 UTP14CQ5TAP6 766 aaKnown RBP12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 XRRA1Q6P2D8 792 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 SYNE3Q6ZMZ3 975 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 SERINC5Q86VE9 423 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 MAFAQ8NHW3 353 aaPredicted RBP12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 CAGE1Q8TC20 777 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 AFAP1L1Q8TED9 768 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 PCYT2Q99447 389 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 SENP7Q9BQF6 1050 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 KATNAL1Q9BW62 490 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 FTOQ9C0B1 505 aaKnown RBP eCLIP12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 RIC8AQ9NPQ8 531 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 SETD4Q9NVD3 440 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 RBM28Q9NW13 759 aaKnown RBP12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 CUL9Q8IWT3 2517 aa12.61□□□□□ -0.39
EXOSC1-202ENST00000370885 NID2Q14112 1375 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 EPOPA6NHQ4 379 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 EDIL3O43854 480 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 PFKMP08237 780 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 ARP10275 920 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 ANP32AP39687 249 aaKnown RBP12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 NAPAP54920 295 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 DEFB103AP81534 67 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 BLOC1S2Q6QNY1 142 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 FBXL16Q8N461 479 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 GPRASP2Q96D09 838 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 ZBTB10Q96DT7 871 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 USP26Q9BXU7 913 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 JADE2Q9NQC1 790 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 PRDM6Q9NQX0 595 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
EXOSC1-202ENST00000370885 C17orf102A2RUQ5 167 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 RFXAPO00287 272 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 NOP56O00567 594 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 HMGB1P09429 215 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 METAP2P50579 478 aaKnown RBP eCLIP12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 RCAN1P53805 252 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 ITGB3BPQ13352 177 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 TOB2Q14106 344 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms