RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SMIM10L2AP0DMW4 78 aa24.46■■□□□ 1.51
CD47-202ENST00000361309 SMIM10L2BP0DMW5 78 aa24.46■■□□□ 1.51
CD47-202ENST00000361309 HTRA4P83105 476 aaPredicted RBP24.46■■□□□ 1.51
CD47-202ENST00000361309 TRAF1Q13077 416 aa24.46■■□□□ 1.51
CD47-202ENST00000361309 PLEKHG4Q58EX7 1191 aa24.46■■□□□ 1.51
CD47-202ENST00000361309 HOXC8P31273 242 aa24.45■■□□□ 1.5
CD47-202ENST00000361309 TRDNQ13061 729 aa24.45■■□□□ 1.5
CD47-202ENST00000361309 TMEM31Q5JXX7 168 aa24.45■■□□□ 1.5
CD47-202ENST00000361309 RNPEPQ9H4A4 650 aa24.45■■□□□ 1.5
CD47-202ENST00000361309 CD320Q9NPF0 282 aa24.45■■□□□ 1.5
CD47-202ENST00000361309 RALGAPA2Q2PPJ7 1873 aa24.45■■□□□ 1.5
CD47-202ENST00000361309 MYO7AQ13402 2215 aa24.45■■□□□ 1.5
CD47-202ENST00000361309 CYTH3O43739 400 aa24.44■■□□□ 1.5
CD47-202ENST00000361309 SP7Q8TDD2 431 aaPredicted RBP24.44■■□□□ 1.5
CD47-202ENST00000361309 OSBPL7Q9BZF2 842 aa24.44■■□□□ 1.5
CD47-202ENST00000361309 SENP2Q9HC62 589 aa24.44■■□□□ 1.5
CD47-202ENST00000361309 PNMA6FA0A0J9YX94 578 aa24.43■■□□□ 1.5
CD47-202ENST00000361309 NOP56O00567 594 aaKnown RBP24.43■■□□□ 1.5
CD47-202ENST00000361309 IFIT3O14879 490 aaKnown RBP24.43■■□□□ 1.5
CD47-202ENST00000361309 CTSHP09668 335 aa24.43■■□□□ 1.5
CD47-202ENST00000361309 KCNA5P22460 613 aa24.43■■□□□ 1.5
CD47-202ENST00000361309 MRPS9P82933 396 aaKnown RBP24.43■■□□□ 1.5
CD47-202ENST00000361309 LEXMQ3ZCV2 418 aa24.43■■□□□ 1.5
CD47-202ENST00000361309 SEPT8Q92599 483 aa24.43■■□□□ 1.5
CD47-202ENST00000361309 ATG2AQ2TAZ0 1938 aa24.42■■□□□ 1.5
CD47-202ENST00000361309 GNPTABQ3T906 1256 aa24.42■■□□□ 1.5
CD47-202ENST00000361309 EPC2Q52LR7 807 aa24.42■■□□□ 1.5
CD47-202ENST00000361309 CYFIP1Q7L576 1253 aa24.42■■□□□ 1.5
CD47-202ENST00000361309 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.42■■□□□ 1.5
CD47-202ENST00000361309 EXOC6Q8TAG9 804 aa24.42■■□□□ 1.5
CD47-202ENST00000361309 USP26Q9BXU7 913 aa24.42■■□□□ 1.5
CD47-202ENST00000361309 C11orf16Q9NQ32 467 aa24.42■■□□□ 1.5
CD47-202ENST00000361309 RTEL1Q9NZ71 1219 aa24.42■■□□□ 1.5
CD47-202ENST00000361309 HCN4Q9Y3Q4 1203 aa24.42■■□□□ 1.5
CD47-202ENST00000361309 FRMPD4Q14CM0 1322 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 ERICH2A1L162 156 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 FAM86C2PA6NEL3 165 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 UPP2O95045 317 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 CYP21A2P08686 494 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 ICAM3P32942 547 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 SEMA3FQ13275 785 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 NEDD9Q14511 834 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 METTL7BQ6UX53 244 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 PIBF1Q8WXW3 757 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 TOP1MTQ969P6 601 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 MRPL38Q96DV4 380 aaKnown RBP24.41■■□□□ 1.5
CD47-202ENST00000361309 INPP4AQ96PE3 977 aaPredicted RBP24.41■■□□□ 1.5
CD47-202ENST00000361309 YME1L1Q96TA2 773 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 GPR20Q99678 358 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 SETD4Q9NVD3 440 aa24.41■■□□□ 1.5
CD47-202ENST00000361309 U3KPZ7 1027 aaPredicted RBP24.41■■□□□ 1.5
CD47-202ENST00000361309 SPATA31C2B4DYI2 1134 aa24.4■■□□□ 1.5
CD47-202ENST00000361309 PI4K2BG5E9Z4 385 aa24.4■■□□□ 1.5
CD47-202ENST00000361309 GPR37L1O60883 481 aa24.4■■□□□ 1.5
CD47-202ENST00000361309 CAND2O75155 1236 aa24.4■■□□□ 1.5
CD47-202ENST00000361309 STAM2O75886 525 aa24.4■■□□□ 1.5
CD47-202ENST00000361309 TROAPQ12815 778 aa24.4■■□□□ 1.5
CD47-202ENST00000361309 WTAPQ15007 396 aa24.4■■□□□ 1.5
CD47-202ENST00000361309 SAMD11Q96NU1 681 aa24.4■■□□□ 1.5
CD47-202ENST00000361309 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.39■■□□□ 1.49
CD47-202ENST00000361309 GNAT1P11488 350 aa24.39■■□□□ 1.49
CD47-202ENST00000361309 GSPT1P15170 499 aaKnown RBP24.39■■□□□ 1.49
CD47-202ENST00000361309 PTH1RQ03431 593 aa24.39■■□□□ 1.49
CD47-202ENST00000361309 PTPROQ16827 1216 aa24.39■■□□□ 1.49
CD47-202ENST00000361309 TRIM50Q86XT4 487 aa24.39■■□□□ 1.49
CD47-202ENST00000361309 FAM178BQ8IXR5 827 aa24.39■■□□□ 1.49
CD47-202ENST00000361309 TELO2Q9Y4R8 837 aa24.39■■□□□ 1.49
CD47-202ENST00000361309 ARIH1Q9Y4X5 557 aaPredicted RBP24.39■■□□□ 1.49
CD47-202ENST00000361309 TAF6LQ9Y6J9 622 aa24.39■■□□□ 1.49
CD47-202ENST00000361309 COL4A6Q14031 1691 aa24.38■■□□□ 1.49
CD47-202ENST00000361309 FIBPO43427 364 aa24.38■■□□□ 1.49
CD47-202ENST00000361309 IL9P15248 144 aa24.38■■□□□ 1.49
CD47-202ENST00000361309 UTP14CQ5TAP6 766 aaKnown RBP24.38■■□□□ 1.49
CD47-202ENST00000361309 PTCRAQ6ISU1 281 aaPredicted RBP24.38■■□□□ 1.49
CD47-202ENST00000361309 RALYLQ86SE5 291 aaKnown RBP24.38■■□□□ 1.49
CD47-202ENST00000361309 H3BNC9 293 aa24.37■■□□□ 1.49
CD47-202ENST00000361309 GPM6BQ13491 265 aa24.37■■□□□ 1.49
CD47-202ENST00000361309 SART3Q15020 963 aaKnown RBP24.37■■□□□ 1.49
CD47-202ENST00000361309 TTC22Q5TAA0 569 aa24.37■■□□□ 1.49
CD47-202ENST00000361309 CATIPQ7Z7H3 387 aa24.37■■□□□ 1.49
CD47-202ENST00000361309 TMEM192Q8IY95 271 aa24.37■■□□□ 1.49
CD47-202ENST00000361309 GJD3Q8N144 294 aa24.37■■□□□ 1.49
CD47-202ENST00000361309 NCOA7Q8NI08 942 aa24.37■■□□□ 1.49
CD47-202ENST00000361309 IFIH1Q9BYX4 1025 aaKnown RBP24.37■■□□□ 1.49
CD47-202ENST00000361309 ZNF215Q9UL58 517 aaPredicted RBP24.37■■□□□ 1.49
CD47-202ENST00000361309 E7EWF7 191 aa24.36■■□□□ 1.49
CD47-202ENST00000361309 PDE4AP27815 886 aa24.36■■□□□ 1.49
CD47-202ENST00000361309 ADAM17P78536 824 aa24.36■■□□□ 1.49
CD47-202ENST00000361309 ARHGAP4P98171 946 aa24.36■■□□□ 1.49
CD47-202ENST00000361309 SP4Q02446 784 aa24.36■■□□□ 1.49
CD47-202ENST00000361309 TIGD5Q53EQ6 642 aa24.36■■□□□ 1.49
CD47-202ENST00000361309 BANK1Q8NDB2 785 aa24.36■■□□□ 1.49
CD47-202ENST00000361309 RUFY2Q8WXA3 655 aa24.36■■□□□ 1.49
CD47-202ENST00000361309 APBB2Q92870 758 aa24.36■■□□□ 1.49
CD47-202ENST00000361309 LOXHD1Q8IVV2 1947 aa24.35■■□□□ 1.49
CD47-202ENST00000361309 GRXCR2A6NFK2 248 aa24.35■■□□□ 1.49
CD47-202ENST00000361309 HOXD11P31277 338 aaPredicted RBP24.35■■□□□ 1.49
CD47-202ENST00000361309 SSTR3P32745 418 aaPredicted RBP24.35■■□□□ 1.49
CD47-202ENST00000361309 FAM26DQ5JW98 314 aa24.35■■□□□ 1.49
CD47-202ENST00000361309 USP17L6PQ6QN14 398 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms