RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 TBC1D16Q8TBP0 767 aa24.73■■□□□ 1.55
CCSER2-202ENST00000359979 CAVIN3Q969G5 261 aa24.73■■□□□ 1.55
CCSER2-202ENST00000359979 GLT8D2Q9H1C3 349 aa24.73■■□□□ 1.55
CCSER2-202ENST00000359979 LCMT1Q9UIC8 334 aa24.73■■□□□ 1.55
CCSER2-202ENST00000359979 PCDHA2Q9Y5H9 948 aa24.73■■□□□ 1.55
CCSER2-202ENST00000359979 MARCH6O60337 910 aa24.72■■□□□ 1.55
CCSER2-202ENST00000359979 ATP2B2Q01814 1243 aa24.72■■□□□ 1.55
CCSER2-202ENST00000359979 NNTQ13423 1086 aa24.72■■□□□ 1.55
CCSER2-202ENST00000359979 CFAP221Q4G0U5 840 aa24.72■■□□□ 1.55
CCSER2-202ENST00000359979 TRIM59Q8IWR1 403 aa24.72■■□□□ 1.55
CCSER2-202ENST00000359979 ZC3H3Q8IXZ2 948 aaKnown RBP24.72■■□□□ 1.55
CCSER2-202ENST00000359979 SH3GL2Q99962 352 aa24.72■■□□□ 1.55
CCSER2-202ENST00000359979 RASSF4Q9H2L5 321 aa24.72■■□□□ 1.55
CCSER2-202ENST00000359979 ATP6V0A2Q9Y487 856 aa24.72■■□□□ 1.55
CCSER2-202ENST00000359979 GOLGA6CA6NDK9 693 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 GOLGA8KD6RF30 607 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 ZBTB5O15062 677 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 GOLGA6DP0CG33 693 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 SF3B2Q13435 895 aaKnown RBP24.71■■□□□ 1.55
CCSER2-202ENST00000359979 ALS2CLQ60I27 953 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 GOLGA6AQ9NYA3 693 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 POLLQ9UGP5 575 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 ATF5Q9Y2D1 282 aaPredicted RBP24.71■■□□□ 1.55
CCSER2-202ENST00000359979 OPA1O60313 960 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 TLR2O60603 784 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 CLSTN1O94985 981 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 LSM14BQ9BX40 385 aaKnown RBP24.71■■□□□ 1.55
CCSER2-202ENST00000359979 PSTPIP2Q9H939 334 aa24.71■■□□□ 1.55
CCSER2-202ENST00000359979 CXCR5P32302 372 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 NAB2Q15742 525 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 C8orf74Q6P047 294 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 PPP4R3CPQ6ZMV5 832 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 FAM196AQ6ZSG2 479 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 NLRC4Q9NPP4 1024 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 SERPINB13Q9UIV8 391 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.7■■□□□ 1.54
CCSER2-202ENST00000359979 NCK2O43639 380 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 EPB41P11171 864 aaKnown RBP24.7■■□□□ 1.54
CCSER2-202ENST00000359979 EIF6P56537 245 aaKnown RBP24.7■■□□□ 1.54
CCSER2-202ENST00000359979 PICALMQ13492 652 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 FOXR1Q6PIV2 292 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 GBP6Q6ZN66 633 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 ANKRD13CQ8N6S4 541 aa24.7■■□□□ 1.54
CCSER2-202ENST00000359979 GRID2IPA4D2P6 1211 aa24.69■■□□□ 1.54
CCSER2-202ENST00000359979 PPFIA1Q13136 1202 aa24.69■■□□□ 1.54
CCSER2-202ENST00000359979 SLC18A3Q16572 532 aa24.69■■□□□ 1.54
CCSER2-202ENST00000359979 KCTD10Q9H3F6 313 aa24.69■■□□□ 1.54
CCSER2-202ENST00000359979 AIPL1Q9NZN9 384 aa24.69■■□□□ 1.54
CCSER2-202ENST00000359979 BUB1O43683 1085 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 PLA2G4BP0C869 781 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 HOXA10P31260 410 aaPredicted RBP24.68■■□□□ 1.54
CCSER2-202ENST00000359979 MATR3P43243 847 aaKnown RBP eCLIP24.68■■□□□ 1.546e-6■■■■□ 21.9
CCSER2-202ENST00000359979 POLR2FP61218 127 aaKnown RBP24.68■■□□□ 1.54
CCSER2-202ENST00000359979 EDRF1Q3B7T1 1238 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 ZNF772Q68DY9 489 aaPredicted RBP24.68■■□□□ 1.54
CCSER2-202ENST00000359979 PSMB7Q99436 277 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 RBM12Q9NTZ6 932 aaKnown RBP24.68■■□□□ 1.54
CCSER2-202ENST00000359979 PCDHGC5Q9Y5F6 944 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 PITPNM2Q9BZ72 1349 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 FRMD3A2A2Y4 597 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 ERCC3P19447 782 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 USP11P51784 963 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 NAP1L1P55209 391 aaKnown RBP24.68■■□□□ 1.54
CCSER2-202ENST00000359979 SLC7A5Q01650 507 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 RGS17Q9UGC6 210 aaPredicted RBP24.68■■□□□ 1.54
CCSER2-202ENST00000359979 KIAA1024Q9UPX6 916 aa24.68■■□□□ 1.54
CCSER2-202ENST00000359979 TTBK2Q6IQ55 1244 aa24.67■■□□□ 1.54
CCSER2-202ENST00000359979 IFT20Q8IY31 132 aa24.67■■□□□ 1.54
CCSER2-202ENST00000359979 SCFD1Q8WVM8 642 aa24.67■■□□□ 1.54
CCSER2-202ENST00000359979 KCNMB3Q9NPA1 279 aa24.67■■□□□ 1.54
CCSER2-202ENST00000359979 CYP3A7-CYP3A51PA0A087WV96 503 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 E9PMD0 336 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 SSBP05455 408 aaKnown RBP eCLIP24.66■■□□□ 1.54
CCSER2-202ENST00000359979 CYP3A7P24462 503 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 HERC4Q5GLZ8 1057 aaPredicted RBP24.66■■□□□ 1.54
CCSER2-202ENST00000359979 GPBP1Q86WP2 473 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 CLEC10AQ8IUN9 316 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 MBOAT7Q96N66 472 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 CRAMP1Q96RY5 1269 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 FGFBP2Q9BYJ0 223 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 DDX4Q9NQI0 724 aaKnown RBP24.66■■□□□ 1.54
CCSER2-202ENST00000359979 GDF3Q9NR23 364 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 EMILIN3Q9NT22 766 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 SMARCAL1Q9NZC9 954 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 EHD2Q9NZN4 543 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 ATAD5Q96QE3 1844 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 BTNL10A8MVZ5 291 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 USP17L10C9JJH3 530 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 CYP11B2P19099 503 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 SHMT1P34896 483 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 GTF2IP78347 998 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 MOXD1Q6UVY6 613 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 TMC4Q7Z404 712 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 C10orf67Q8IYJ2 551 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 RSPH14Q9UHP6 348 aa24.66■■□□□ 1.54
CCSER2-202ENST00000359979 THSD7AQ9UPZ6 1657 aa24.65■■□□□ 1.54
CCSER2-202ENST00000359979 PALMO75781 387 aa24.65■■□□□ 1.54
CCSER2-202ENST00000359979 SERPINB2P05120 415 aa24.65■■□□□ 1.54
CCSER2-202ENST00000359979 C10orf76Q5T2E6 689 aa24.65■■□□□ 1.54
CCSER2-202ENST00000359979 MEI1Q5TIA1 1274 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms