RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 PBX2P40425 430 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 RTN1Q16799 776 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 MYSM1Q5VVJ2 828 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 GDF6Q6KF10 455 aaPredicted RBP13.2□□□□□ -0.3
CDRT1-202ENST00000354433 APOA5Q6Q788 366 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 Q6ZUG5 572 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 KAT2BQ92831 832 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 FTOQ9C0B1 505 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDRT1-202ENST00000354433 PSTPIP2Q9H939 334 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 RBM28Q9NW13 759 aaKnown RBP13.2□□□□□ -0.3
CDRT1-202ENST00000354433 MSRAQ9UJ68 235 aa13.2□□□□□ -0.3
CDRT1-202ENST00000354433 FRMPD4Q14CM0 1322 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 SPDYE3A6NKU9 549 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 GOLGA8AA7E2F4 631 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 GOLGA8BA8MQT2 603 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 FIBPO43427 364 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 BRD1O95696 1058 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 ACTN1P12814 892 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 SP2Q02086 613 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 SP4Q02446 784 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 RAB30Q15771 203 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 RASIP1Q5U651 963 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 CAGE1Q8TC20 777 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 ZNF576Q9H609 170 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 HDAC6Q9UBN7 1215 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 GTF2IRD1Q9UHL9 959 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 SLC4A7Q9Y6M7 1214 aa13.19□□□□□ -0.3
CDRT1-202ENST00000354433 CNTNAP5Q8WYK1 1306 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 KIAA1217Q5T5P2 1943 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 KLF18A0A0U1RQI7 1052 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 MEIS2O14770 477 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 LARGE1O95461 756 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 IQCF3P0C7M6 154 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 RFC2P35250 354 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 EVCP57679 992 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
CDRT1-202ENST00000354433 NEDD9Q14511 834 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 UBE2SQ16763 222 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 CYFIP1Q7L576 1253 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 NLRX1Q86UT6 975 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 SESTD1Q86VW0 696 aa13.18□□□□□ -0.3
CDRT1-202ENST00000354433 INPP4AQ96PE3 977 aaPredicted RBP13.18□□□□□ -0.3
CDRT1-202ENST00000354433 GOLGA6L22H0YM25 854 aa13.17□□□□□ -0.3
CDRT1-202ENST00000354433 PPFIA4O75335 1185 aa13.17□□□□□ -0.3
CDRT1-202ENST00000354433 NAPAP54920 295 aa13.17□□□□□ -0.3
CDRT1-202ENST00000354433 GRIN2CQ14957 1233 aa13.17□□□□□ -0.3
CDRT1-202ENST00000354433 PCNX4Q63HM2 1172 aa13.17□□□□□ -0.3
CDRT1-202ENST00000354433 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
CDRT1-202ENST00000354433 MAFAQ8NHW3 353 aaPredicted RBP13.17□□□□□ -0.3
CDRT1-202ENST00000354433 AFAP1L1Q8TED9 768 aa13.17□□□□□ -0.3
CDRT1-202ENST00000354433 ZNF274Q96GC6 653 aaPredicted RBP13.17□□□□□ -0.3
CDRT1-202ENST00000354433 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
CDRT1-202ENST00000354433 ZDHHC9Q9Y397 364 aa13.17□□□□□ -0.3
CDRT1-202ENST00000354433 MYH15Q9Y2K3 1946 aa13.17□□□□□ -0.3
CDRT1-202ENST00000354433 PFKFB2O60825 505 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 LGALS2P05162 132 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 ATP2A2P16615 1042 aaKnown RBP13.16□□□□□ -0.3
CDRT1-202ENST00000354433 ICAM3P32942 547 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 ST3GAL1Q11201 340 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 METTL7BQ6UX53 244 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 LRRC8DQ7L1W4 858 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 GTF3C6Q969F1 213 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 LLPHQ9BRT6 129 aaKnown RBP13.16□□□□□ -0.3
CDRT1-202ENST00000354433 NKX2-4Q9H2Z4 354 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 SLC28A3Q9HAS3 691 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 PKD2L1Q9P0L9 805 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 BRPF3Q9ULD4 1205 aa13.16□□□□□ -0.3
CDRT1-202ENST00000354433 SPATA31C2B4DYI2 1134 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 H3BRB1 525 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 BAG4O95429 457 aaKnown RBP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 HOXD8P13378 290 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 SELPP16109 830 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 PDCP20941 246 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 RABGGTBP53611 331 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 UTP14CQ5TAP6 766 aaKnown RBP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 WWC2Q6AWC2 1192 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 XRRA1Q6P2D8 792 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 BRF1Q92994 677 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 CDHR1Q96JP9 859 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 GAS2L1Q99501 681 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 LARP6Q9BRS8 491 aaKnown RBP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 TUT1Q9H6E5 874 aaKnown RBP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 ZNF215Q9UL58 517 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 C17orf102A2RUQ5 167 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 HAS3O00219 553 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 GJB2P29033 226 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 KCNJ6P48051 423 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 ZNF200P98182 395 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 SEMA3FQ13275 785 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 PTK7Q13308 1070 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 MTMR1Q13613 665 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 PKP1Q13835 747 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 SKOR2Q2VWA4 1001 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 PPP2R2DQ66LE6 453 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 TRIM50Q86XT4 487 aa13.15□□□□□ -0.3
CDRT1-202ENST00000354433 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDRT1-202ENST00000354433 C16orf70Q9BSU1 422 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms