RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ECE1P42892 770 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 MATR3P43243 847 aaKnown RBP eCLIP6.71□□□□□ -1.343e-6■■■■□ 21.7
CLCN3-201ENST00000347613 DNA2P51530 1060 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 RNASE9P60153 205 aaKnown RBP6.71□□□□□ -1.34
CLCN3-201ENST00000347613 ARID5AQ03989 594 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 KLHDC7AQ5VTJ3 777 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 CHADLQ6NUI6 762 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 CTAGE6Q86UF2 777 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 CCDC84Q86UT8 332 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-201ENST00000347613 CTAGE4Q8IX94 777 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 CEP112Q8N8E3 955 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 TLR10Q9BXR5 811 aa6.71□□□□□ -1.34
CLCN3-201ENST00000347613 ZBTB5O15062 677 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 PRPF6O94906 941 aaKnown RBP6.7□□□□□ -1.34
CLCN3-201ENST00000347613 SSBP05455 408 aaKnown RBP eCLIP6.7□□□□□ -1.34
CLCN3-201ENST00000347613 SLC9A1P19634 815 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 HNRNPH3P31942 346 aaKnown RBP6.7□□□□□ -1.34
CLCN3-201ENST00000347613 CASP4P49662 377 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 SLC12A3P55017 1021 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 DGKZQ13574 1117 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 SOGA3Q5TF21 947 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 SP8Q8IXZ3 490 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 TSEN2Q8NCE0 465 aaKnown RBP6.7□□□□□ -1.34
CLCN3-201ENST00000347613 RBM46Q8TBY0 533 aaKnown RBP6.7□□□□□ -1.34
CLCN3-201ENST00000347613 LZTS2Q9BRK4 669 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 HAUS4Q9H6D7 363 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 SH2D4AQ9H788 454 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 PSTPIP2Q9H939 334 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 KCNMB3Q9NPA1 279 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 RGL1Q9NZL6 768 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 ATAD5Q96QE3 1844 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 A0A087X0T9 212 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 LCA5LO95447 670 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 FAM228BP0C875 321 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 MYBP10242 640 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 CHRNA5P30532 468 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 CRKP46108 304 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 UBXN2AP68543 259 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 COG2Q14746 738 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 BRD3Q15059 726 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 WHAMMP3Q1A5X7 153 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 COBLL1Q53SF7 1204 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 PPP4R3AQ6IN85 833 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 KIAA1328Q86T90 577 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 ETNPPLQ8TBG4 499 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 CRAMP1Q96RY5 1269 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 PANK4Q9NVE7 773 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 ARGLU1Q9NWB6 273 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-201ENST00000347613 PCDHA12Q9UN75 941 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 COL4A5P29400 1685 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 ESYT3A0FGR9 886 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 FAM153BP0C7A2 387 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 VAV2P52735 878 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 CYP4A11Q02928 519 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 TRIM14Q14142 442 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 PDIA5Q14554 519 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 CCDC96Q2M329 555 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 FAM153CQ494X1 144 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 WDR93Q6P2C0 686 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 GUF1Q8N442 669 aaKnown RBP6.7□□□□□ -1.34
CLCN3-201ENST00000347613 CALML4Q96GE6 196 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 MAGEC2Q9UBF1 373 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-201ENST00000347613 FAM153AQ9UHL3 310 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 HPCAL4Q9UM19 191 aa6.7□□□□□ -1.34
CLCN3-201ENST00000347613 TRIM66O15016 1216 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 MYL1P05976 194 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 PLA2G4BP0C869 781 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 KLRC1P26715 233 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 SMARCA1P28370 1054 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 GGCXP38435 758 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 CNNM4Q6P4Q7 775 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 PDXDC1Q6P996 788 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 AMOTL1Q8IY63 956 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 ZSWIM2Q8NEG5 633 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 RUSC1Q9BVN2 902 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 RABEP2Q9H5N1 569 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 TDRD3Q9H7E2 651 aaKnown RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 JADE2Q9NQC1 790 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 RBM12Q9NTZ6 932 aaKnown RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 SNX12Q9UMY4 172 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 PCDHA1Q9Y5I3 950 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 SPATA31A6Q5VVP1 1343 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 A0A1W2PQJ5 194 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 YDJCA8MPS7 323 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 FTCDO95954 541 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 ZBTB48P10074 688 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 POLR2FP61218 127 aaKnown RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 PABPC4Q13310 644 aaKnown RBP eCLIP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 GIT2Q14161 759 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 CDC37Q16543 378 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 ASPRV1Q53RT3 343 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 PRR16Q569H4 304 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 CCNI2Q6ZMN8 369 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 ELMO3Q96BJ8 720 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 PRMT6Q96LA8 375 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 PYM1Q9BRP8 204 aaKnown RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 IFIH1Q9BYX4 1025 aaKnown RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 GLIS2Q9BZE0 524 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 CUEDC2Q9H467 287 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 PVALEFA0A1B0GWK0 134 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms