RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 KLRF2D3W0D1 207 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 H3BRB1 525 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 CAND2O75155 1236 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 SMIM10L2AP0DMW4 78 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 SMIM10L2BP0DMW5 78 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 NEK9Q8TD19 979 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 YME1L1Q96TA2 773 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 TUT1Q9H6E5 874 aaKnown RBP13.34□□□□□ -0.27
CSMD2-202ENST00000338325 KAT6AQ92794 2004 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 H3BNC9 293 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 HIP1O00291 1037 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 TREHO43280 583 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 LGALS2P05162 132 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 ALADP13716 330 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 GPM6BQ13491 265 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 BANK1Q8NDB2 785 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 GPKOWQ92917 476 aaPredicted RBP eCLIP13.34□□□□□ -0.27
CSMD2-202ENST00000338325 TOP1MTQ969P6 601 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 MAD2L2Q9UI95 211 aa13.34□□□□□ -0.27
CSMD2-202ENST00000338325 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
CSMD2-202ENST00000338325 GCOM1H8Y6P7 765 aaPredicted RBP13.33□□□□□ -0.28
CSMD2-202ENST00000338325 NOP56O00567 594 aaKnown RBP13.33□□□□□ -0.28
CSMD2-202ENST00000338325 UPP2O95045 317 aa13.33□□□□□ -0.28
CSMD2-202ENST00000338325 CTSHP09668 335 aa13.33□□□□□ -0.28
CSMD2-202ENST00000338325 POLR2MP0CAP2 368 aa13.33□□□□□ -0.28
CSMD2-202ENST00000338325 TRAF1Q13077 416 aa13.33□□□□□ -0.28
CSMD2-202ENST00000338325 SEC23AQ15436 765 aa13.33□□□□□ -0.28
CSMD2-202ENST00000338325 HOMER1Q86YM7 354 aa13.33□□□□□ -0.28
CSMD2-202ENST00000338325 TMEM192Q8IY95 271 aa13.33□□□□□ -0.28
CSMD2-202ENST00000338325 PABPC5Q96DU9 382 aaKnown RBP13.33□□□□□ -0.28
CSMD2-202ENST00000338325 ZFP91Q96JP5 570 aaPredicted RBP13.33□□□□□ -0.28
CSMD2-202ENST00000338325 RNPEPQ9H4A4 650 aa13.33□□□□□ -0.28
CSMD2-202ENST00000338325 OSBPL3Q9H4L5 887 aa13.33□□□□□ -0.28
CSMD2-202ENST00000338325 BAZ2BQ9UIF8 2168 aaKnown RBP13.33□□□□□ -0.28
CSMD2-202ENST00000338325 MUC6Q6W4X9 2439 aa13.32□□□□□ -0.28
CSMD2-202ENST00000338325 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.32□□□□□ -0.28
CSMD2-202ENST00000338325 PALM3A6NDB9 673 aaPredicted RBP13.32□□□□□ -0.28
CSMD2-202ENST00000338325 GNPTABQ3T906 1256 aa13.32□□□□□ -0.28
CSMD2-202ENST00000338325 TCEAL5Q5H9L2 206 aa13.32□□□□□ -0.28
CSMD2-202ENST00000338325 FCHSD1Q86WN1 690 aa13.32□□□□□ -0.28
CSMD2-202ENST00000338325 PLEKHM2Q8IWE5 1019 aa13.32□□□□□ -0.28
CSMD2-202ENST00000338325 SMC5Q8IY18 1101 aa13.32□□□□□ -0.28
CSMD2-202ENST00000338325 APBB2Q92870 758 aa13.32□□□□□ -0.28
CSMD2-202ENST00000338325 OSBPL7Q9BZF2 842 aa13.32□□□□□ -0.28
CSMD2-202ENST00000338325 NSUN3Q9H649 340 aaKnown RBP13.32□□□□□ -0.28
CSMD2-202ENST00000338325 FAM50BQ9Y247 325 aa13.32□□□□□ -0.28
CSMD2-202ENST00000338325 GNAT1P11488 350 aa13.31□□□□□ -0.28
CSMD2-202ENST00000338325 COL19A1Q14993 1142 aa13.31□□□□□ -0.28
CSMD2-202ENST00000338325 CSPP1Q1MSJ5 1256 aa13.31□□□□□ -0.28
CSMD2-202ENST00000338325 B4GALNT3Q6L9W6 998 aa13.31□□□□□ -0.28
CSMD2-202ENST00000338325 PIGSQ96S52 555 aa13.31□□□□□ -0.28
CSMD2-202ENST00000338325 USP26Q9BXU7 913 aa13.31□□□□□ -0.28
CSMD2-202ENST00000338325 IFIH1Q9BYX4 1025 aaKnown RBP13.31□□□□□ -0.28
CSMD2-202ENST00000338325 BCAS3Q9H6U6 928 aa13.31□□□□□ -0.28
CSMD2-202ENST00000338325 PRKAG3Q9UGI9 489 aa13.31□□□□□ -0.28
CSMD2-202ENST00000338325 FRMPD4Q14CM0 1322 aa13.31□□□□□ -0.28
CSMD2-202ENST00000338325 DCXO43602 365 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 STAM2O75886 525 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 ICAM3P32942 547 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 NEDD9Q14511 834 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 GRM4Q14833 912 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 SLC35G1Q2M3R5 365 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 METTL7BQ6UX53 244 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 CYB5R4Q7L1T6 521 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 CHD1LQ86WJ1 897 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 INPP4AQ96PE3 977 aaPredicted RBP13.3□□□□□ -0.28
CSMD2-202ENST00000338325 UIMC1Q96RL1 719 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 RIOX1Q9H6W3 641 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 SETD4Q9NVD3 440 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 ZNF215Q9UL58 517 aaPredicted RBP13.3□□□□□ -0.28
CSMD2-202ENST00000338325 KIAA1671Q9BY89 1806 aa13.3□□□□□ -0.28
CSMD2-202ENST00000338325 FIBPO43427 364 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 CTNNB1P35222 781 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 MRPS9P82933 396 aaKnown RBP13.29□□□□□ -0.28
CSMD2-202ENST00000338325 ZP2Q05996 745 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 FAM26DQ5JW98 314 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 CYFIP1Q7L576 1253 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 ALYREFQ86V81 257 aaKnown RBP13.29□□□□□ -0.28
CSMD2-202ENST00000338325 TRIM50Q86XT4 487 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 GPR20Q99678 358 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 CLDND1Q9NY35 253 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 PNMA6FA0A0J9YX94 578 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 SPATA31C2B4DYI2 1134 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 C5orf67F2Z3F1 127 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 NCK2O43639 380 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 ADAM17P78536 824 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 NUCB1Q02818 461 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 SEMA3FQ13275 785 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 AAMPQ13685 434 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 RPAINQ86UA6 219 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 FIBCD1Q8N539 461 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 LMBR1Q8WVP7 490 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 IL17RAQ96F46 866 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 LMAN2LQ9H0V9 348 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
CSMD2-202ENST00000338325 RWDD3Q9Y3V2 267 aa13.29□□□□□ -0.28
CSMD2-202ENST00000338325 POTEB3A0JP26 581 aa13.28□□□□□ -0.28
CSMD2-202ENST00000338325 C19orf67A6NJJ6 358 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms