RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SART1O43290 800 aaKnown RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 EIF3BP55884 814 aaKnown RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 TCIRG1Q13488 830 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 FAM26FQ5R3K3 315 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 SH2D4BQ5SQS7 431 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 SDCCAG8Q86SQ7 713 aaPredicted RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 DTX3LQ8TDB6 740 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 XPO6Q96QU8 1125 aaKnown RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 ABCA9Q8IUA7 1624 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 GAS8O95995 478 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 RFC1P35251 1148 aaPredicted RBP14.39□□□□□ -0.11
COL2A1-201ENST00000337299 SLC8A3P57103 927 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 TFAP4Q01664 338 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 SEPT2Q15019 361 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 PUM3Q15397 648 aaKnown RBP14.39□□□□□ -0.11
COL2A1-201ENST00000337299 PPP4R3AQ6IN85 833 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 TMEM154Q6P9G4 183 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 SRRM1Q8IYB3 904 aaKnown RBP14.39□□□□□ -0.11
COL2A1-201ENST00000337299 GPCPD1Q9NPB8 672 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 KDM7AQ6ZMT4 941 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 TRPM8Q7Z2W7 1104 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 FUKQ8N0W3 1084 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 ZNF579Q8NAF0 562 aaKnown RBP14.39□□□□□ -0.11
COL2A1-201ENST00000337299 KCND1Q9NSA2 647 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 LAMC1P11047 1609 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 ERVV-2B6SEH9 535 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 RPS6KA5O75582 802 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 GNAT1P11488 350 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 GBP7Q8N8V2 638 aaPredicted RBP14.39□□□□□ -0.11
COL2A1-201ENST00000337299 HIPK4Q8NE63 616 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 CEP70Q8NHQ1 597 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 TEKT4Q8WW24 435 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 RAPGEF5Q92565 580 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 DISC1Q9NRI5 854 aa14.39□□□□□ -0.11
COL2A1-201ENST00000337299 USP42Q9H9J4 1324 aaKnown RBP14.39□□□□□ -0.11
COL2A1-201ENST00000337299 SMCO2A6NFE2 343 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 CAND2O75155 1236 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 PICALMQ13492 652 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 PPP2R5BQ15173 497 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 EXOC3L4Q17RC7 722 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 STXBP4Q6ZWJ1 553 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 MORC4Q8TE76 937 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 PBKQ96KB5 322 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 TFCP2L1Q9NZI6 479 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 TTI1O43156 1089 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 GFPT2O94808 682 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 GCNT3O95395 438 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 STAMBPO95630 424 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 ADD2P35612 726 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 C6orf118Q5T5N4 469 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 KCNB2Q92953 911 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 GJA10Q969M2 543 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 TRIM51Q9BSJ1 452 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 ADAM33Q9BZ11 813 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 SYNCQ9H7C4 482 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 LARSQ9P2J5 1176 aaKnown RBP14.38□□□□□ -0.11
COL2A1-201ENST00000337299 CCNL1Q9UK58 526 aaPredicted RBP14.38□□□□□ -0.11
COL2A1-201ENST00000337299 TRPC6Q9Y210 931 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 VIRMAQ69YN4 1812 aaKnown RBP14.38□□□□□ -0.11
COL2A1-201ENST00000337299 MAP3K7O43318 606 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 SERPING1P05155 500 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 CUL3Q13618 768 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 P3H4Q92791 437 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 ZBTB1Q9Y2K1 713 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 SNAP23O00161 211 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 STXBP3O00186 592 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 LRRN2O75325 713 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 FAM153BP0C7A2 387 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 KRT5P13647 590 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 FAM153CQ494X1 144 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 PREPLQ4J6C6 727 aaPredicted RBP14.38□□□□□ -0.11
COL2A1-201ENST00000337299 STAG2Q8N3U4 1231 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 MMGT1Q8N4V1 131 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 DDX20Q9UHI6 824 aaKnown RBP14.38□□□□□ -0.11
COL2A1-201ENST00000337299 FAM153AQ9UHL3 310 aa14.38□□□□□ -0.11
COL2A1-201ENST00000337299 SPHKAPQ2M3C7 1700 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 SHROOM2Q13796 1616 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 SNUPNO95149 360 aaKnown RBP14.37□□□□□ -0.11
COL2A1-201ENST00000337299 GLI1P08151 1106 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 LIFRP42702 1097 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 SCARF1Q14162 830 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 PTPAQ15257 358 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 ARHGEF18Q6ZSZ5 1173 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 RUNDC3BQ96NL0 473 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 FGFR1OP2Q9NVK5 253 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 PDE2AO00408 941 aaPredicted RBP14.37□□□□□ -0.11
COL2A1-201ENST00000337299 RIMBP2O15034 1052 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 FCER1AP12319 257 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 SERPINB6P35237 376 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 AARSP49588 968 aaKnown RBP eCLIP14.37□□□□□ -0.11
COL2A1-201ENST00000337299 BCAMP50895 628 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 ANTXR2P58335 489 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 GPBP1Q86WP2 473 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 CELF4Q9BZC1 486 aaKnown RBP14.37□□□□□ -0.11
COL2A1-201ENST00000337299 SH2D4AQ9H788 454 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 DCTN4Q9UJW0 460 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 DBR1Q9UK59 544 aaKnown RBP14.37□□□□□ -0.11
COL2A1-201ENST00000337299 GLI2P10070 1586 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 PASKQ96RG2 1323 aa14.37□□□□□ -0.11
COL2A1-201ENST00000337299 CHMP2AO43633 222 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms