RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 GOLGA6CA6NDK9 693 aa23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 GOLGA6DP0CG33 693 aa23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 MARSP56192 900 aaKnown RBP23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 POLR2FP61218 127 aaKnown RBP23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 SLC20A2Q08357 652 aa23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 FAM182BQ5T319 152 aa23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 GLT8D2Q9H1C3 349 aa23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 GOLGA6AQ9NYA3 693 aa23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 TBC1D7Q9P0N9 293 aa23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 LCMT1Q9UIC8 334 aa23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 SUGT1Q9Y2Z0 365 aa23.71■■□□□ 1.39
PTDSS1-201ENST00000337004 SERPINB2P05120 415 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 PLA2G4BP0C869 781 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 SLC7A5Q01650 507 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 HERC4Q5GLZ8 1057 aaPredicted RBP23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 HAUS3Q68CZ6 603 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 C8orf74Q6P047 294 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 GJA10Q969M2 543 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 ATP6V0A2Q9Y487 856 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 MYO3BQ8WXR4 1341 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 E9PMD0 336 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 SLC26A4O43511 780 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 TRIM59Q8IWR1 403 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 RASSF4Q9H2L5 321 aa23.7■■□□□ 1.38
PTDSS1-201ENST00000337004 USP17L10C9JJH3 530 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 TLR2O60603 784 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 TNFRSF8P28908 595 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 SLC16A2P36021 539 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 FOXR1Q6PIV2 292 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 NELFCDQ8IXH7 590 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 SMARCAL1Q9NZC9 954 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 ATF5Q9Y2D1 282 aaPredicted RBP23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 PCDHA2Q9Y5H9 948 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 OPA1O60313 960 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 PPFIA4O75335 1185 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 DDX4Q9NQI0 724 aaKnown RBP23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 EMILIN3Q9NT22 766 aa23.69■■□□□ 1.38
PTDSS1-201ENST00000337004 BTAF1O14981 1849 aa23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 GOLGA8KD6RF30 607 aa23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 EPS15P42566 896 aa23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 NAB2Q15742 525 aa23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 ALS2CLQ60I27 953 aa23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 GPBP1Q86WP2 473 aa23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 TMEM51Q9NW97 253 aa23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 EHD2Q9NZN4 543 aa23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 RSPH14Q9UHP6 348 aa23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 CDK5RAP2Q96SN8 1893 aa23.68■■□□□ 1.38
PTDSS1-201ENST00000337004 F8W031 263 aaPredicted RBP23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 HOXA10P31260 410 aaPredicted RBP23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 ADAM9Q13443 819 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 SLC18A3Q16572 532 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 PPP4R3CPQ6ZMV5 832 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 KCTD1Q719H9 257 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 FGFBP2Q9BYJ0 223 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 RBM12Q9NTZ6 932 aaKnown RBP23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 USP40Q9NVE5 1235 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 MPHOSPH10O00566 681 aaKnown RBP23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 USP11P51784 963 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 MRPS25P82663 173 aaKnown RBP23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 PPFIA1Q13136 1202 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 C10orf67Q8IYJ2 551 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 SCFD1Q8WVM8 642 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 TBC1D5Q92609 795 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 CAVIN3Q969G5 261 aa23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.67■■□□□ 1.38
PTDSS1-201ENST00000337004 PALMO75781 387 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 KRT18P05783 430 aaKnown RBP23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 SHMT1P34896 483 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 RAPGEF1Q13905 1077 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 IFT20Q8IY31 132 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 CRAMP1Q96RY5 1269 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 TRIM34Q9BYJ4 488 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 COA1Q9GZY4 146 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 KCTD10Q9H3F6 313 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 AIPL1Q9NZN9 384 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 CETN3O15182 167 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 SHOX2O60902 331 aaPredicted RBP23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 HLA-DOAP06340 250 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 CYP11B2P19099 503 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 KLHL30Q0D2K2 578 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 EDRF1Q3B7T1 1238 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 RUFY1Q96T51 708 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 C10orf71Q711Q0 1435 aa23.66■■□□□ 1.38
PTDSS1-201ENST00000337004 POTEB3A0JP26 581 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 POTECB2RU33 542 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 HSF2BPO75031 334 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 POTEBQ6S5H4 581 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 TMC4Q7Z404 712 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 SLFN12Q8IYM2 578 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 MS4A14Q96JA4 679 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 SH3GL2Q99962 352 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 NHSQ6T4R5 1651 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 PITPNM2Q9BZ72 1349 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 NPHP3-ACAD11A0A0J9YXS1 232 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 TRIM66O15016 1216 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 GYS1P13807 737 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 NNTQ13423 1086 aa23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 ZC3H3Q8IXZ2 948 aaKnown RBP23.65■■□□□ 1.38
PTDSS1-201ENST00000337004 KCNMB3Q9NPA1 279 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms