RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 ATXN2LQ8WWM7 1075 aaKnown RBP16.91■□□□□ 0.3
TSPO-201ENST00000329563 WNT8BQ93098 351 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 SNX21Q969T3 373 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 INPP4AQ96PE3 977 aaPredicted RBP16.91■□□□□ 0.3
TSPO-201ENST00000329563 SLC9A7Q96T83 725 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 LZTS2Q9BRK4 669 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 KATNAL1Q9BW62 490 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 RTEL1Q9NZ71 1219 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 THEGQ9P2T0 379 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 HDAC6Q9UBN7 1215 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 YBX2Q9Y2T7 364 aaKnown RBP16.91■□□□□ 0.3
TSPO-201ENST00000329563 TRANK1O15050 2925 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 KIF28PB7ZC32 967 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 PARNO95453 639 aaKnown RBP16.9■□□□□ 0.3
TSPO-201ENST00000329563 CPA1P15085 419 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 ZNF200P98182 395 aaPredicted RBP16.9■□□□□ 0.3
TSPO-201ENST00000329563 FUT2Q10981 343 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 MFSD10Q14728 455 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 KIAA0753Q2KHM9 967 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 APOA5Q6Q788 366 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 PHOSPHO2Q8TCD6 241 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 PPM1EQ8WY54 764 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 SPATA33Q96N06 139 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 C16orf70Q9BSU1 422 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 ALG1Q9BT22 464 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 AGXT2Q9BYV1 514 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 GTF2IRD1Q9UHL9 959 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 CNTNAP5Q8WYK1 1306 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 PTPRSQ13332 1948 aa16.9■□□□□ 0.3
TSPO-201ENST00000329563 BDP1A6H8Y1 2624 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 SPATA31C2B4DYI2 1134 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 BAIAP3O94812 1187 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 CALM1P0DP23 149 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 CALM2P0DP24 149 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 CALM3P0DP25 149 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 ICAM3P32942 547 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 GNAQP50148 359 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 RABGGTBP53611 331 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 BECN1Q14457 450 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 UBE2SQ16763 222 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 TYW1BQ6NUM6 668 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 KCNV1Q6PIU1 500 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 Q6ZUG5 572 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 USP38Q8NB14 1042 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 SMARCC2Q8TAQ2 1214 aa16.89■□□□□ 0.29
TSPO-201ENST00000329563 FTOQ9C0B1 505 aaKnown RBP eCLIP16.89■□□□□ 0.29
TSPO-201ENST00000329563 FAM217BQ9NTX9 383 aaPredicted RBP16.89■□□□□ 0.29
TSPO-201ENST00000329563 SEC63Q9UGP8 760 aaKnown RBP16.89■□□□□ 0.29
TSPO-201ENST00000329563 TET1Q8NFU7 2136 aa16.88■□□□□ 0.29
TSPO-201ENST00000329563 PPFIA4O75335 1185 aa16.88■□□□□ 0.29
TSPO-201ENST00000329563 TGFB3P10600 412 aa16.88■□□□□ 0.29
TSPO-201ENST00000329563 MYOGP15173 224 aa16.88■□□□□ 0.29
TSPO-201ENST00000329563 TCTN1Q2MV58 587 aa16.88■□□□□ 0.29
TSPO-201ENST00000329563 PCNX4Q63HM2 1172 aa16.88■□□□□ 0.29
TSPO-201ENST00000329563 TRAF7Q6Q0C0 670 aa16.88■□□□□ 0.29
TSPO-201ENST00000329563 AFAP1L1Q8TED9 768 aa16.88■□□□□ 0.29
TSPO-201ENST00000329563 ZSCAN31Q96LW9 406 aaPredicted RBP16.88■□□□□ 0.29
TSPO-201ENST00000329563 PRRC2BQ5JSZ5 2229 aaKnown RBP16.87■□□□□ 0.29
TSPO-201ENST00000329563 GTPBP6O43824 516 aaPredicted RBP16.87■□□□□ 0.29
TSPO-201ENST00000329563 KCNJ6P48051 423 aa16.87■□□□□ 0.29
TSPO-201ENST00000329563 AK2P54819 239 aa16.87■□□□□ 0.29
TSPO-201ENST00000329563 MRPS5P82675 430 aaKnown RBP16.87■□□□□ 0.29
TSPO-201ENST00000329563 RBL2Q08999 1139 aa16.87■□□□□ 0.29
TSPO-201ENST00000329563 TRIM71Q2Q1W2 868 aaKnown RBP16.87■□□□□ 0.29
TSPO-201ENST00000329563 WWC2Q6AWC2 1192 aa16.87■□□□□ 0.29
TSPO-201ENST00000329563 SYNE3Q6ZMZ3 975 aa16.87■□□□□ 0.29
TSPO-201ENST00000329563 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
TSPO-201ENST00000329563 C7orf31Q8N865 590 aa16.87■□□□□ 0.29
TSPO-201ENST00000329563 PSTPIP2Q9H939 334 aa16.87■□□□□ 0.29
TSPO-201ENST00000329563 LIMCH1Q9UPQ0 1083 aa16.87■□□□□ 0.29
TSPO-201ENST00000329563 FIBPO43427 364 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 ATP9AO75110 1047 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 STAM2O75886 525 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 ITGB5P18084 799 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 CDC27P30260 824 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 EVCP57679 992 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 GNPTABQ3T906 1256 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 CYFIP1Q7L576 1253 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 BRF1Q92994 677 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 GPR20Q99678 358 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 MLXIPQ9HAP2 919 aa16.86■□□□□ 0.29
TSPO-201ENST00000329563 MUC3AQ02505 3323 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 TNFRSF10AO00220 468 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 NBNO60934 754 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 LGALS2P05162 132 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 CKBP12277 381 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 SELPP16109 830 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 HOXC8P31273 242 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 TOB2Q14106 344 aaPredicted RBP16.85■□□□□ 0.29
TSPO-201ENST00000329563 ADGRE1Q14246 886 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 MBTPS1Q14703 1052 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 CCDC85BQ15834 202 aaPredicted RBP16.85■□□□□ 0.29
TSPO-201ENST00000329563 AAK1Q2M2I8 961 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 METTL7BQ6UX53 244 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 LRRC8DQ7L1W4 858 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 TRIM50Q86XT4 487 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 CUL5Q93034 780 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 ASB2Q96Q27 587 aa16.85■□□□□ 0.29
TSPO-201ENST00000329563 PRDM6Q9NQX0 595 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms