RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 NKRFO15226 690 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDE4D-201ENST00000309641 MMP3P08254 477 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 NKX3-2P78367 333 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 FOXD4L5Q5VV16 416 aaPredicted RBP10.32□□□□□ -0.76
PDE4D-201ENST00000309641 KCNV1Q6PIU1 500 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 NIPA1Q7RTP0 329 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 RNF180Q86T96 592 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 ARRDC4Q8NCT1 418 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 ETNPPLQ8TBG4 499 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 FOXD4L4Q8WXT5 416 aaPredicted RBP10.32□□□□□ -0.76
PDE4D-201ENST00000309641 SENP7Q9BQF6 1050 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 ZNF577Q9BSK1 485 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 SENP6Q9GZR1 1112 aaPredicted RBP10.32□□□□□ -0.76
PDE4D-201ENST00000309641 MLXIPQ9HAP2 919 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 TSHZ2Q9NRE2 1034 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 DDX25Q9UHL0 483 aaKnown RBP10.32□□□□□ -0.76
PDE4D-201ENST00000309641 MTMR6Q9Y217 621 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 Q9Y3F1 56 aa10.32□□□□□ -0.76
PDE4D-201ENST00000309641 MAFGO15525 162 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 STX6O43752 255 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 CCNE2O96020 404 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 COL6A1P12109 1028 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 CST5P28325 142 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-201ENST00000309641 MCM7P33993 719 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 ACLYP53396 1101 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 LAMC2Q13753 1193 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 NEDD9Q14511 834 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 ZNF174Q15697 407 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 Q4G0T1 1027 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 PPP4R3AQ6IN85 833 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 METTL7BQ6UX53 244 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 TRIM50Q86XT4 487 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 HAS1Q92839 578 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 EMID1Q96A84 441 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-201ENST00000309641 TMEM60Q9H2L4 133 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 SPC25Q9HBM1 224 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 A0A1W2PQ45 241 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-201ENST00000309641 A0A1W2PQY0 241 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 KBTBD13C9JR72 458 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 MYL3P08590 195 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 ZNF286BP0CG31 522 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 PDCP20941 246 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 ATN1P54259 1190 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-201ENST00000309641 PSMC6P62333 389 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 PURAQ00577 322 aaKnown RBP10.31□□□□□ -0.76
PDE4D-201ENST00000309641 RESTQ13127 1097 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 MOXD1Q6UVY6 613 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 PPTC7Q8NI37 304 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 CDHR1Q96JP9 859 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 GPR20Q99678 358 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 KCNMB3Q9NPA1 279 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 PCDHB6Q9Y5E3 794 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 GRIN2DO15399 1336 aa10.31□□□□□ -0.76
PDE4D-201ENST00000309641 GSTTP1A0A1W2PQM5 241 aa10.3□□□□□ -0.76
PDE4D-201ENST00000309641 RBAK-RBAKDNI3L0D1 243 aa10.3□□□□□ -0.76
PDE4D-201ENST00000309641 CPT1AP50416 773 aa10.3□□□□□ -0.76
PDE4D-201ENST00000309641 SETQ01105 290 aaPredicted RBP10.3□□□□□ -0.76
PDE4D-201ENST00000309641 BECN1Q14457 450 aa10.3□□□□□ -0.76
PDE4D-201ENST00000309641 ANKLE1Q8NAG6 615 aa10.3□□□□□ -0.76
PDE4D-201ENST00000309641 KAT2BQ92831 832 aa10.3□□□□□ -0.76
PDE4D-201ENST00000309641 SLC5A5Q92911 643 aa10.3□□□□□ -0.76
PDE4D-201ENST00000309641 FTOQ9C0B1 505 aaKnown RBP eCLIP10.3□□□□□ -0.76
PDE4D-201ENST00000309641 JPH1Q9HDC5 661 aaPredicted RBP10.3□□□□□ -0.76
PDE4D-201ENST00000309641 SLC9A2Q9UBY0 812 aa10.3□□□□□ -0.76
PDE4D-201ENST00000309641 PHF24Q9UPV7 400 aa10.3□□□□□ -0.76
PDE4D-201ENST00000309641 LAMA2P24043 3122 aaKnown RBP10.3□□□□□ -0.76
PDE4D-201ENST00000309641 RANBP2P49792 3224 aaKnown RBP10.3□□□□□ -0.76
PDE4D-201ENST00000309641 PSMD10O75832 226 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 HOXD8P13378 290 aaPredicted RBP10.29□□□□□ -0.76
PDE4D-201ENST00000309641 GCFC2P16383 781 aaKnown RBP10.29□□□□□ -0.76
PDE4D-201ENST00000309641 CHMP4BP1P59074 171 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 ACTR2P61160 394 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 TTC38Q5R3I4 469 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 PCYT2Q99447 389 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 SDF4Q9BRK5 362 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 C11orf49Q9H6J7 331 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 ZDHHC9Q9Y397 364 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 NFASCO94856 1347 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 NOP56O00567 594 aaKnown RBP10.29□□□□□ -0.76
PDE4D-201ENST00000309641 CHMP2AO43633 222 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 TCF7P36402 384 aaPredicted RBP10.29□□□□□ -0.76
PDE4D-201ENST00000309641 DGKDQ16760 1214 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 LRRC26Q2I0M4 334 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 FOXD4L6Q3SYB3 417 aaPredicted RBP10.29□□□□□ -0.76
PDE4D-201ENST00000309641 UTP14CQ5TAP6 766 aaKnown RBP10.29□□□□□ -0.76
PDE4D-201ENST00000309641 LRCH2Q5VUJ6 765 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 FOXD4L3Q6VB84 417 aaPredicted RBP10.29□□□□□ -0.76
PDE4D-201ENST00000309641 NECAB2Q7Z6G3 386 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 C4orf32Q8N8J7 132 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 PCSK9Q8NBP7 692 aaKnown RBP10.29□□□□□ -0.76
PDE4D-201ENST00000309641 VTI1AQ96AJ9 217 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 CHAMP1Q96JM3 812 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 C16orf70Q9BSU1 422 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 TSEN34Q9BSV6 310 aaKnown RBP10.29□□□□□ -0.76
PDE4D-201ENST00000309641 UNC45AQ9H3U1 944 aa10.29□□□□□ -0.76
PDE4D-201ENST00000309641 RBM19Q9Y4C8 960 aaKnown RBP10.29□□□□□ -0.76
PDE4D-201ENST00000309641 MOXD2PA6NHM9 499 aa10.28□□□□□ -0.76
PDE4D-201ENST00000309641 EML1O00423 815 aa10.28□□□□□ -0.76
PDE4D-201ENST00000309641 NEMFO60524 1076 aa10.28□□□□□ -0.76
PDE4D-201ENST00000309641 GAS7O60861 476 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms