RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 LDHBP07195 334 aaKnown RBP12.67□□□□□ -0.38
SNIP1-201ENST00000296215 IFNA8P32881 189 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 DSG1Q02413 1049 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 RIPK1Q13546 671 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 CUL1Q13616 776 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 TMEM63BQ5T3F8 832 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 NFRKBQ6P4R8 1299 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 PROSER2Q86WR7 435 aaPredicted RBP12.67□□□□□ -0.38
SNIP1-201ENST00000296215 NEK9Q8TD19 979 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 STK32AQ8WU08 396 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 RAPGEF5Q92565 580 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 TRIM55Q9BYV6 548 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 PHAXQ9H814 394 aaKnown RBP12.67□□□□□ -0.38
SNIP1-201ENST00000296215 MRPL44Q9H9J2 332 aaKnown RBP12.67□□□□□ -0.38
SNIP1-201ENST00000296215 C12orf4Q9NQ89 552 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 TEKT2Q9UIF3 430 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 ZFP69BQ9UJL9 534 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 PCDHA7Q9UN72 937 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 DOLKQ9UPQ8 538 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 CTNND2Q9UQB3 1225 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 JAK2O60674 1132 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 PFKFB1P16118 471 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 STX3Q13277 289 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 SLC9C1Q4G0N8 1177 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 RIBC1Q8N443 379 aaPredicted RBP12.67□□□□□ -0.38
SNIP1-201ENST00000296215 PPP2R3CQ969Q6 453 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 CEP44Q9C0F1 390 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 EPS15L1Q9UBC2 864 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 ATP6V1HQ9UI12 483 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 RASGRF2O14827 1237 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 SPTLC1O15269 473 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 CNOT3O75175 753 aaKnown RBP12.66□□□□□ -0.38
SNIP1-201ENST00000296215 VAV1P15498 845 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 MTF1Q14872 753 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 SYT2Q8N9I0 419 aaPredicted RBP12.66□□□□□ -0.38
SNIP1-201ENST00000296215 FGFR1OP2Q9NVK5 253 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 RWDD3Q9Y3V2 267 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 ANKRD30BQ9BXX2 1392 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 CDH3P22223 829 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 ASPHQ12797 758 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 TRIM65Q6PJ69 517 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 HEATR3Q7Z4Q2 680 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 NME9Q86XW9 330 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 RSPH1Q8WYR4 309 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 MRRFQ96E11 262 aaKnown RBP12.66□□□□□ -0.38
SNIP1-201ENST00000296215 LRGUKQ96M69 825 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 NEUROD6Q96NK8 337 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 CCDC28BQ9BUN5 200 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 RNPEPL1Q9HAU8 725 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 HNRNPCL2B2RXH8 293 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 HNRNPCL1O60812 293 aaKnown RBP12.66□□□□□ -0.38
SNIP1-201ENST00000296215 SEMA3DO95025 777 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 AP1B1Q10567 949 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 TTF1Q15361 905 aaPredicted RBP12.66□□□□□ -0.38
SNIP1-201ENST00000296215 PRR23CQ6ZRP0 262 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 HIPK4Q8NE63 616 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 TRPC7Q9HCX4 862 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
SNIP1-201ENST00000296215 NAIPQ13075 1403 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 ARAP1Q96P48 1450 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 ANO9A1A5B4 782 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 DEAF1O75398 565 aaPredicted RBP12.66□□□□□ -0.38
SNIP1-201ENST00000296215 IARSP41252 1262 aaKnown RBP12.66□□□□□ -0.38
SNIP1-201ENST00000296215 PDCD4Q53EL6 469 aaKnown RBP12.66□□□□□ -0.38
SNIP1-201ENST00000296215 RGS9BPQ6ZS82 235 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 SDR16C5Q8N3Y7 309 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 NRBF2Q96F24 287 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 C19orf44Q9H6X5 657 aa12.66□□□□□ -0.38
SNIP1-201ENST00000296215 MGRN1O60291 552 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 ZWINTO95229 277 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 CHN1P15882 459 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 TKTP29401 623 aaKnown RBP12.65□□□□□ -0.38
SNIP1-201ENST00000296215 PTGS2P35354 604 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 KRT6CP48668 564 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 ERFP50548 548 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 NUP107P57740 925 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 ITIH3Q06033 890 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 TYW1BQ6NUM6 668 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 TTC30BQ8N4P2 665 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 PRPF18Q99633 342 aaKnown RBP12.65□□□□□ -0.38
SNIP1-201ENST00000296215 BUB1O43683 1085 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 NAA20P61599 178 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 TSGA10IPQ3SY00 556 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 NEK5Q6P3R8 708 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 MARK2Q7KZI7 788 aaKnown RBP12.65□□□□□ -0.38
SNIP1-201ENST00000296215 DCLK2Q8N568 766 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 ANKRD13CQ8N6S4 541 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 HPS3Q969F9 1004 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 PRMT1Q99873 361 aaKnown RBP12.65□□□□□ -0.38
SNIP1-201ENST00000296215 PYM1Q9BRP8 204 aaKnown RBP12.65□□□□□ -0.38
SNIP1-201ENST00000296215 CUEDC2Q9H467 287 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
SNIP1-201ENST00000296215 TDRKHQ9Y2W6 561 aaKnown RBP12.65□□□□□ -0.38
SNIP1-201ENST00000296215 ZBBXA8MT70 800 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 TCAIMQ8N3R3 496 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 SPIRE2Q8WWL2 714 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 LPIN2Q92539 896 aa12.65□□□□□ -0.38
SNIP1-201ENST00000296215 VPS50Q96JG6 964 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms