RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 APBA2Q99767 749 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 EFCC1Q9HA90 598 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 ASTN1O14525 1302 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 KDM3AQ9Y4C1 1321 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 MSH4O15457 936 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 TGFB3P10600 412 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 MRPS9P82933 396 aaKnown RBP9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 NEK9Q8TD19 979 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 HAS1Q92839 578 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 SAMM50Q9Y512 469 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 SPATA31C2B4DYI2 1134 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 TXLNAP40222 546 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 PRMT2P55345 433 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 LACTBP83111 547 aaPredicted RBP9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 MAP2K1Q02750 393 aaPredicted RBP9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 PDE4DQ08499 809 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 HYIQ5T013 277 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 ZIC5Q96T25 663 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 TMEM60Q9H2L4 133 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 SRCAPQ6ZRS2 3230 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 PSMD10O75832 226 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 XRCC5P13010 732 aaKnown RBP9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 SP4Q02446 784 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 FAM160A1Q05DH4 1040 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 MTMR1Q13613 665 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 KIF22Q14807 665 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 IL17AQ16552 155 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 PRR16Q569H4 304 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 B3GNT9Q6UX72 402 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 CCSER1Q9C0I3 900 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 CUEDC2Q9H467 287 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 DDX19AQ9NUU7 478 aaKnown RBP9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 HOOK1Q9UJC3 728 aaKnown RBP9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 VAV3Q9UKW4 847 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 EIF2AK2P19525 551 aaKnown RBP9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 C1QTNF8P60827 252 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 ARHGEF6Q15052 776 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 IL31RAQ8NI17 732 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 TEKT3Q9BXF9 490 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 PDILTQ8N807 584 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 CSRNP2Q9H175 543 aa9.47□□□□□ -0.89
PTPDC1-201ENST00000288976 ZSWIM8A7E2V4 1837 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 NKRFO15226 690 aaKnown RBP eCLIP9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 JAK3P52333 1124 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 SPIRE1Q08AE8 756 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 HAUS3Q68CZ6 603 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 SHC4Q6S5L8 630 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 ERMNQ8TAM6 284 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 ERO1AQ96HE7 468 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 MAML3Q96JK9 1138 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 NUDT12Q9BQG2 462 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 ZNF577Q9BSK1 485 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 KCNH7Q9NS40 1196 aa9.46□□□□□ -0.89
PTPDC1-201ENST00000288976 LETM1O95202 739 aaPredicted RBP9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 ITGB5P18084 799 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 SFNP31947 248 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 SYCP1Q15431 976 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 ENGASEQ8NFI3 743 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 POLR3CQ9BUI4 534 aaPredicted RBP9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 CCDC39Q9UFE4 941 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 GJD2Q9UKL4 321 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 GINS2Q9Y248 185 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 COBLO75128 1261 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 GADD45BO75293 160 aaPredicted RBP9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 MARCKSP29966 332 aaPredicted RBP9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 KRT76Q01546 638 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 CNTN2Q02246 1040 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 ZNF746Q6NUN9 644 aaPredicted RBP9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 SMAP1Q8IYB5 467 aaPredicted RBP9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 GPT2Q8TD30 523 aa9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 EMID1Q96A84 441 aaPredicted RBP9.46□□□□□ -0.9
PTPDC1-201ENST00000288976 GLIPR1L2Q4G1C9 344 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 KANK3Q6NY19 840 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 CHAMP1Q96JM3 812 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 TUFT1Q9NNX1 390 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 VWA3AA6NCI4 1184 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 CTAGE5O15320 804 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 PEX10O60683 326 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 MYL1P05976 194 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 KCNA2P16389 499 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 SP3Q02447 781 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 SEMA3FQ13275 785 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 ARMCX2Q7L311 632 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 CKAP2LQ8IYA6 745 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 FMR1NBQ8N0W7 255 aaPredicted RBP9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 FSIP1Q8NA03 581 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 NT5C3AQ9H0P0 336 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 PCDHA12Q9UN75 941 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 IPO5O00410 1097 aaKnown RBP9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 RGS20O76081 388 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 PFKFB1P16118 471 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 HOXD10P28358 340 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 SNW1Q13573 536 aaKnown RBP9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 NEDD9Q14511 834 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 TMEM119Q4V9L6 283 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 LRCH2Q5VUJ6 765 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 SYMPKQ92797 1274 aaKnown RBP9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 KATNBL1Q9H079 304 aa9.45□□□□□ -0.9
PTPDC1-201ENST00000288976 GOLPH3LQ9H4A5 285 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms