RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 NIPA1Q7RTP0 329 aa20.8■□□□□ 0.92
SDF4-201ENST00000263741 RNF180Q86T96 592 aa20.8■□□□□ 0.92
SDF4-201ENST00000263741 KLHDC9Q8NEP7 349 aa20.8■□□□□ 0.92
SDF4-201ENST00000263741 CDHR1Q96JP9 859 aa20.8■□□□□ 0.92
SDF4-201ENST00000263741 SPATA33Q96N06 139 aa20.8■□□□□ 0.92
SDF4-201ENST00000263741 ZNF577Q9BSK1 485 aa20.8■□□□□ 0.92
SDF4-201ENST00000263741 MLXIPQ9HAP2 919 aa20.8■□□□□ 0.92
SDF4-201ENST00000263741 SPC25Q9HBM1 224 aa20.8■□□□□ 0.92
SDF4-201ENST00000263741 MYH9P35579 1960 aaKnown RBP20.79■□□□□ 0.92
SDF4-201ENST00000263741 MSH4O15457 936 aa20.79■□□□□ 0.92
SDF4-201ENST00000263741 KCNA10Q16322 511 aa20.79■□□□□ 0.92
SDF4-201ENST00000263741 PAWRQ96IZ0 340 aaKnown RBP20.79■□□□□ 0.92
SDF4-201ENST00000263741 KBTBD13C9JR72 458 aa20.79■□□□□ 0.92
SDF4-201ENST00000263741 IPO5O00410 1097 aaKnown RBP20.79■□□□□ 0.92
SDF4-201ENST00000263741 DNM1LO00429 736 aa20.79■□□□□ 0.92
SDF4-201ENST00000263741 STX6O43752 255 aa20.79■□□□□ 0.92
SDF4-201ENST00000263741 MMP3P08254 477 aa20.79■□□□□ 0.92
SDF4-201ENST00000263741 ARRDC4Q8NCT1 418 aa20.79■□□□□ 0.92
SDF4-201ENST00000263741 PPP1R13LQ8WUF5 828 aa20.79■□□□□ 0.92
SDF4-201ENST00000263741 MBOAT7Q96N66 472 aa20.79■□□□□ 0.92
SDF4-201ENST00000263741 Q9Y3F1 56 aa20.79■□□□□ 0.92
SDF4-201ENST00000263741 SCN10AQ9Y5Y9 1956 aa20.78■□□□□ 0.92
SDF4-201ENST00000263741 CYP3A7-CYP3A51PA0A087WV96 503 aa20.78■□□□□ 0.92
SDF4-201ENST00000263741 CYP3A7P24462 503 aa20.78■□□□□ 0.92
SDF4-201ENST00000263741 MCM7P33993 719 aa20.78■□□□□ 0.92
SDF4-201ENST00000263741 TOB1P50616 345 aaPredicted RBP20.78■□□□□ 0.92
SDF4-201ENST00000263741 NEDD9Q14511 834 aa20.78■□□□□ 0.92
SDF4-201ENST00000263741 CCSAPQ6IQ19 270 aaPredicted RBP20.78■□□□□ 0.92
SDF4-201ENST00000263741 METTL7BQ6UX53 244 aa20.78■□□□□ 0.92
SDF4-201ENST00000263741 CXCL17Q6UXB2 119 aa20.78■□□□□ 0.92
SDF4-201ENST00000263741 ASGR1P07306 291 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 MYL3P08590 195 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 ZNF286BP0CG31 522 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 Q4G0T1 1027 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 SENP7Q9BQF6 1050 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 CST5P28325 142 aaPredicted RBP20.77■□□□□ 0.92
SDF4-201ENST00000263741 CPT1AP50416 773 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 ACLYP53396 1101 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 LAMC2Q13753 1193 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 ZNF174Q15697 407 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 TTC38Q5R3I4 469 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 PPP4R3AQ6IN85 833 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 FAM173BQ6P4H8 233 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 MOXD1Q6UVY6 613 aa20.77■□□□□ 0.92
SDF4-201ENST00000263741 EMID1Q96A84 441 aaPredicted RBP20.77■□□□□ 0.92
SDF4-201ENST00000263741 JPH1Q9HDC5 661 aaPredicted RBP20.77■□□□□ 0.92
SDF4-201ENST00000263741 A6NJR5 290 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 NOP56O00567 594 aaKnown RBP20.76■□□□□ 0.91
SDF4-201ENST00000263741 PPTC7Q8NI37 304 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 ETNPPLQ8TBG4 499 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 SDF4Q9BRK5 362 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 PCDHB6Q9Y5E3 794 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 MAFGO15525 162 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 DHX15O43143 795 aaKnown RBP20.76■□□□□ 0.91
SDF4-201ENST00000263741 CCNE2O96020 404 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 GCFC2P16383 781 aaKnown RBP20.76■□□□□ 0.91
SDF4-201ENST00000263741 RESTQ13127 1097 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 TRIM50Q86XT4 487 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 ANKLE1Q8NAG6 615 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 SENP6Q9GZR1 1112 aaPredicted RBP20.76■□□□□ 0.91
SDF4-201ENST00000263741 TMEM60Q9H2L4 133 aa20.76■□□□□ 0.91
SDF4-201ENST00000263741 NOL7Q9UMY1 257 aaKnown RBP20.76■□□□□ 0.91
SDF4-201ENST00000263741 TRIP12Q14669 1992 aaPredicted RBP20.75■□□□□ 0.91
SDF4-201ENST00000263741 A0A1W2PQ45 241 aaPredicted RBP20.75■□□□□ 0.91
SDF4-201ENST00000263741 A0A1W2PQY0 241 aa20.75■□□□□ 0.91
SDF4-201ENST00000263741 CHMP4BP1P59074 171 aa20.75■□□□□ 0.91
SDF4-201ENST00000263741 NKX3-2P78367 333 aa20.75■□□□□ 0.91
SDF4-201ENST00000263741 UBE2Q1Q7Z7E8 422 aa20.75■□□□□ 0.91
SDF4-201ENST00000263741 SLC5A5Q92911 643 aa20.75■□□□□ 0.91
SDF4-201ENST00000263741 GPR20Q99678 358 aa20.75■□□□□ 0.91
SDF4-201ENST00000263741 SLC9A2Q9UBY0 812 aa20.75■□□□□ 0.91
SDF4-201ENST00000263741 CHMP2AO43633 222 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 NEMFO60524 1076 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 ATN1P54259 1190 aaPredicted RBP20.74■□□□□ 0.91
SDF4-201ENST00000263741 PSMC6P62333 389 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 LRCH2Q5VUJ6 765 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 HAS1Q92839 578 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 KCNMB3Q9NPA1 279 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 PHF24Q9UPV7 400 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 NFASCO94856 1347 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 TNRC18O15417 2968 aaPredicted RBP20.74■□□□□ 0.91
SDF4-201ENST00000263741 GAS7O60861 476 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 COL6A1P12109 1028 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 PURAQ00577 322 aaKnown RBP20.74■□□□□ 0.91
SDF4-201ENST00000263741 PCSK9Q8NBP7 692 aaKnown RBP20.74■□□□□ 0.91
SDF4-201ENST00000263741 GIMAP8Q8ND71 665 aaPredicted RBP20.74■□□□□ 0.91
SDF4-201ENST00000263741 C11orf49Q9H6J7 331 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 KAT6AQ92794 2004 aa20.74■□□□□ 0.91
SDF4-201ENST00000263741 ACTR2P61160 394 aa20.73■□□□□ 0.91
SDF4-201ENST00000263741 UTP14CQ5TAP6 766 aaKnown RBP20.73■□□□□ 0.91
SDF4-201ENST00000263741 FTOQ9C0B1 505 aaKnown RBP eCLIP20.73■□□□□ 0.913e-7■■□□□ 11.7
SDF4-201ENST00000263741 TCHHQ07283 1943 aa20.73■□□□□ 0.91
SDF4-201ENST00000263741 GSTTP1A0A1W2PQM5 241 aa20.73■□□□□ 0.91
SDF4-201ENST00000263741 TCF7P36402 384 aaPredicted RBP20.73■□□□□ 0.91
SDF4-201ENST00000263741 CALCRLQ16602 461 aa20.73■□□□□ 0.91
SDF4-201ENST00000263741 DGKDQ16760 1214 aa20.73■□□□□ 0.91
SDF4-201ENST00000263741 FOXD4L6Q3SYB3 417 aaPredicted RBP20.73■□□□□ 0.91
SDF4-201ENST00000263741 BRDTQ58F21 947 aaPredicted RBP20.73■□□□□ 0.91
SDF4-201ENST00000263741 FOXD4L3Q6VB84 417 aaPredicted RBP20.73■□□□□ 0.91
SDF4-201ENST00000263741 NECAB2Q7Z6G3 386 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms