RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ATP6V1DQ9Y5K8 247 aa15.97■□□□□ 0.15
VPS25-201ENST00000253794 SYNRGQ9UMZ2 1314 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 A6NJR5 290 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 CTAGE5O15320 804 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 GGPS1O95749 300 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 CNGA1P29973 690 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 NASPP49321 788 aaPredicted RBP15.96■□□□□ 0.15
VPS25-201ENST00000253794 ZNF174Q15697 407 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 CALCRLQ16602 461 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 COL13A1Q5TAT6 717 aaPredicted RBP15.96■□□□□ 0.15
VPS25-201ENST00000253794 FAM173BQ6P4H8 233 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 TLK2Q86UE8 772 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 PPTC7Q8NI37 304 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 ZNF396Q96N95 335 aaPredicted RBP15.96■□□□□ 0.15
VPS25-201ENST00000253794 RNF208Q9H0X6 261 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 TMEM60Q9H2L4 133 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 OGDHLQ9ULD0 1010 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 CEP131Q9UPN4 1083 aa15.96■□□□□ 0.15
VPS25-201ENST00000253794 OR52Z1P0C646 297 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 ATP2B1P20020 1258 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 SPIRE1Q08AE8 756 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 PTGDRQ13258 359 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 PPP2R5CQ13362 524 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 PTPAQ15257 358 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 GJC2Q5T442 439 aaPredicted RBP15.95■□□□□ 0.14
VPS25-201ENST00000253794 ANO1Q5XXA6 986 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 ARL6IP4Q66PJ3 421 aaKnown RBP15.95■□□□□ 0.14
VPS25-201ENST00000253794 ZNF746Q6NUN9 644 aaPredicted RBP15.95■□□□□ 0.14
VPS25-201ENST00000253794 CYFIP1Q7L576 1253 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 DHX37Q8IY37 1157 aaKnown RBP15.95■□□□□ 0.14
VPS25-201ENST00000253794 KLHDC9Q8NEP7 349 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 COPS5Q92905 334 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 LENG1Q96BZ8 264 aaPredicted RBP15.95■□□□□ 0.14
VPS25-201ENST00000253794 USP28Q96RU2 1077 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 SDF4Q9BRK5 362 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 JPH1Q9HDC5 661 aaPredicted RBP15.95■□□□□ 0.14
VPS25-201ENST00000253794 XPNPEP3Q9NQH7 507 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 SLC9A2Q9UBY0 812 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 VAV3Q9UKW4 847 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 FRMPD3Q5JV73 1810 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 MYH15Q9Y2K3 1946 aa15.95■□□□□ 0.14
VPS25-201ENST00000253794 ATG7O95352 703 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 BAG4O95429 457 aaKnown RBP15.94■□□□□ 0.14
VPS25-201ENST00000253794 GJA8P48165 433 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 CPT1AP50416 773 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 KRT76Q01546 638 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 SLC39A14Q15043 492 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
VPS25-201ENST00000253794 LRCH2Q5VUJ6 765 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 FOXD4L5Q5VV16 416 aaPredicted RBP15.94■□□□□ 0.14
VPS25-201ENST00000253794 CCSAPQ6IQ19 270 aaPredicted RBP15.94■□□□□ 0.14
VPS25-201ENST00000253794 SMAP1Q8IYB5 467 aaPredicted RBP15.94■□□□□ 0.14
VPS25-201ENST00000253794 RDM1Q8NG50 284 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 OR6J1Q8NGC5 347 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 FOXD4L4Q8WXT5 416 aaPredicted RBP15.94■□□□□ 0.14
VPS25-201ENST00000253794 TEKT3Q9BXF9 490 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 BCAS3Q9H6U6 928 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 MLXIPQ9HAP2 919 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 CLIC4Q9Y696 253 aa15.94■□□□□ 0.14
VPS25-201ENST00000253794 DYNC1LI2O43237 492 aaPredicted RBP15.93■□□□□ 0.14
VPS25-201ENST00000253794 GAS7O60861 476 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 SGPL1O95470 568 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 YEATS4O95619 227 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 CCNE2O96020 404 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 FXR2P51116 673 aaKnown RBP eCLIP15.93■□□□□ 0.14
VPS25-201ENST00000253794 HSDL1Q3SXM5 330 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 U2AF1L4Q8WU68 220 aaKnown RBP15.93■□□□□ 0.14
VPS25-201ENST00000253794 SPATA33Q96N06 139 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 DEFB118Q96PH6 123 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 GPR20Q99678 358 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 AP5M1Q9H0R1 490 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 SPC25Q9HBM1 224 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 CFAP45Q9UL16 551 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 ELP1O95163 1332 aa15.93■□□□□ 0.14
VPS25-201ENST00000253794 IGKV6D-21A0A0A0MT36 114 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 PPFIA4O75335 1185 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 MMP3P08254 477 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 PTGS1P23219 599 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 SFNP31947 248 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 JAK3P52333 1124 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 ACTR2P61160 394 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 DNM1Q05193 864 aaKnown RBP15.92■□□□□ 0.14
VPS25-201ENST00000253794 LRRC41Q15345 812 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 FSCN1Q16658 493 aaKnown RBP15.92■□□□□ 0.14
VPS25-201ENST00000253794 RNF180Q86T96 592 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 IGSF22Q8N9C0 903 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 ANKLE1Q8NAG6 615 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 LINC00301Q8NCQ3 95 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 ARRDC4Q8NCT1 418 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 TSEN34Q9BSV6 310 aaKnown RBP15.92■□□□□ 0.14
VPS25-201ENST00000253794 FTOQ9C0B1 505 aaKnown RBP eCLIP15.92■□□□□ 0.14
VPS25-201ENST00000253794 UNC45AQ9H3U1 944 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 TTC12Q9H892 705 aaPredicted RBP15.92■□□□□ 0.14
VPS25-201ENST00000253794 PKD2L1Q9P0L9 805 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 PCDHA12Q9UN75 941 aa15.92■□□□□ 0.14
VPS25-201ENST00000253794 GSTTP1A0A1W2PQM5 241 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 MYADML2A6NDP7 307 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 KPNA6O60684 536 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 LGR5O75473 907 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 PGK1P00558 417 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms