RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 FKBP3Q00688 224 aaKnown RBP28.26■■■□□ 2.11
RAB40C-201ENST00000248139 KIAA0825Q8IV33 1275 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 CRAMP1Q96RY5 1269 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 TRIM34Q9BYJ4 488 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 COA1Q9GZY4 146 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 FAM204AQ9H8W3 233 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 HPCAL4Q9UM19 191 aa28.26■■■□□ 2.11
RAB40C-201ENST00000248139 FGFR1OPO95684 399 aaKnown RBP28.25■■■□□ 2.11
RAB40C-201ENST00000248139 PSMC6P62333 389 aa28.25■■■□□ 2.11
RAB40C-201ENST00000248139 FOXR1Q6PIV2 292 aa28.25■■■□□ 2.11
RAB40C-201ENST00000248139 SLC30A10Q6XR72 485 aa28.25■■■□□ 2.11
RAB40C-201ENST00000248139 OSBPL9Q96SU4 736 aa28.25■■■□□ 2.11
RAB40C-201ENST00000248139 TSGA10Q9BZW7 698 aa28.25■■■□□ 2.11
RAB40C-201ENST00000248139 EEF2P13639 858 aaKnown RBP28.25■■■□□ 2.11
RAB40C-201ENST00000248139 CASP5P51878 434 aa28.25■■■□□ 2.11
RAB40C-201ENST00000248139 CCNI2Q6ZMN8 369 aaPredicted RBP28.25■■■□□ 2.11
RAB40C-201ENST00000248139 G3V3G9 751 aa28.24■■■□□ 2.11
RAB40C-201ENST00000248139 RNF40O75150 1001 aa28.24■■■□□ 2.11
RAB40C-201ENST00000248139 DCAF8Q5TAQ9 597 aa28.24■■■□□ 2.11
RAB40C-201ENST00000248139 SP8Q8IXZ3 490 aa28.24■■■□□ 2.11
RAB40C-201ENST00000248139 SELENOOQ9BVL4 669 aa28.24■■■□□ 2.11
RAB40C-201ENST00000248139 KCTD19Q17RG1 926 aaPredicted RBP28.24■■■□□ 2.11
RAB40C-201ENST00000248139 USH1GQ495M9 461 aa28.24■■■□□ 2.11
RAB40C-201ENST00000248139 FAM83BQ5T0W9 1011 aa28.24■■■□□ 2.11
RAB40C-201ENST00000248139 SCFD1Q8WVM8 642 aa28.24■■■□□ 2.11
RAB40C-201ENST00000248139 DDTLA6NHG4 134 aaPredicted RBP28.23■■■□□ 2.11
RAB40C-201ENST00000248139 KRT18P05783 430 aaKnown RBP28.23■■■□□ 2.11
RAB40C-201ENST00000248139 SKIDA1Q1XH10 827 aa28.23■■■□□ 2.11
RAB40C-201ENST00000248139 ASTE1Q2TB18 679 aaPredicted RBP28.23■■■□□ 2.11
RAB40C-201ENST00000248139 SPATA4Q8NEY3 305 aa28.23■■■□□ 2.11
RAB40C-201ENST00000248139 ZNF219Q9P2Y4 722 aaPredicted RBP28.23■■■□□ 2.11
RAB40C-201ENST00000248139 ATF5Q9Y2D1 282 aaPredicted RBP28.23■■■□□ 2.11
RAB40C-201ENST00000248139 ATP6V0A2Q9Y487 856 aa28.23■■■□□ 2.11
RAB40C-201ENST00000248139 PSMD2Q13200 908 aa28.23■■■□□ 2.11
RAB40C-201ENST00000248139 SRCAPQ6ZRS2 3230 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 TUBBP07437 444 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 GGCXP38435 758 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 RBM5P52756 815 aaKnown RBP eCLIP28.22■■■□□ 2.11
RAB40C-201ENST00000248139 RNASE9P60153 205 aaKnown RBP28.22■■■□□ 2.11
RAB40C-201ENST00000248139 PRR16Q569H4 304 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 ARSHQ5FYA8 562 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 GPATCH4Q5T3I0 446 aaKnown RBP28.22■■■□□ 2.11
RAB40C-201ENST00000248139 MEX3CQ5U5Q3 659 aaKnown RBP28.22■■■□□ 2.11
RAB40C-201ENST00000248139 FAM71BQ8TC56 605 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 BMP2KQ9NSY1 1161 aaPredicted RBP28.22■■■□□ 2.11
RAB40C-201ENST00000248139 PACSIN2Q9UNF0 486 aaPredicted RBP28.22■■■□□ 2.11
RAB40C-201ENST00000248139 PCDHA2Q9Y5H9 948 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 ZC3H4Q9UPT8 1303 aaKnown RBP28.22■■■□□ 2.11
RAB40C-201ENST00000248139 TRIM37O94972 964 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 HLA-DOAP06340 250 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 CYP11B2P19099 503 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.22■■■□□ 2.11
RAB40C-201ENST00000248139 ANO3Q9BYT9 981 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 SWAP70Q9UH65 585 aa28.22■■■□□ 2.11
RAB40C-201ENST00000248139 GDF11O95390 407 aa28.21■■■□□ 2.11
RAB40C-201ENST00000248139 ACTN1P12814 892 aa28.21■■■□□ 2.11
RAB40C-201ENST00000248139 CDC37Q16543 378 aaPredicted RBP28.21■■■□□ 2.11
RAB40C-201ENST00000248139 LCA5LO95447 670 aa28.21■■■□□ 2.11
RAB40C-201ENST00000248139 PABPC4Q13310 644 aaKnown RBP eCLIP28.21■■■□□ 2.11
RAB40C-201ENST00000248139 RAPGEF1Q13905 1077 aa28.21■■■□□ 2.11
RAB40C-201ENST00000248139 PTPROQ16827 1216 aa28.21■■■□□ 2.11
RAB40C-201ENST00000248139 TEKT1Q969V4 418 aa28.21■■■□□ 2.11
RAB40C-201ENST00000248139 TLR10Q9BXR5 811 aa28.21■■■□□ 2.11
RAB40C-201ENST00000248139 PACSIN1Q9BY11 444 aa28.21■■■□□ 2.11
RAB40C-201ENST00000248139 EMILIN3Q9NT22 766 aa28.21■■■□□ 2.11
RAB40C-201ENST00000248139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.21■■■□□ 2.11
RAB40C-201ENST00000248139 FAM170AA1A519 330 aa28.2■■■□□ 2.11
RAB40C-201ENST00000248139 SEPT2Q15019 361 aa28.2■■■□□ 2.11
RAB40C-201ENST00000248139 TBC1D5Q92609 795 aa28.2■■■□□ 2.11
RAB40C-201ENST00000248139 TARSL2A2RTX5 802 aaKnown RBP28.2■■■□□ 2.1
RAB40C-201ENST00000248139 FTCDO95954 541 aa28.2■■■□□ 2.1
RAB40C-201ENST00000248139 ADAM9Q13443 819 aa28.2■■■□□ 2.1
RAB40C-201ENST00000248139 KLHDC7AQ5VTJ3 777 aa28.2■■■□□ 2.1
RAB40C-201ENST00000248139 SLFN13Q68D06 897 aa28.2■■■□□ 2.1
RAB40C-201ENST00000248139 PPP1R18Q6NYC8 613 aa28.2■■■□□ 2.1
RAB40C-201ENST00000248139 FAM133AQ8N9E0 248 aa28.2■■■□□ 2.1
RAB40C-201ENST00000248139 RPGRIP1Q96KN7 1286 aa28.2■■■□□ 2.1
RAB40C-201ENST00000248139 LCMT1Q9UIC8 334 aa28.2■■■□□ 2.1
RAB40C-201ENST00000248139 MYH4Q9Y623 1939 aa28.2■■■□□ 2.1
RAB40C-201ENST00000248139 FOCADQ5VW36 1801 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 A0A0U1RQG5 324 aaPredicted RBP28.19■■■□□ 2.1
RAB40C-201ENST00000248139 ACTN2P35609 894 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 CRKP46108 304 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 CYP4A11Q02928 519 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 CCDC181Q5TID7 509 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 CCDC65Q8IXS2 484 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 LRRC27Q9C0I9 530 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 PSD3Q9NYI0 1048 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 THSD7AQ9UPZ6 1657 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 MAP9Q49MG5 647 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 SFMBT2Q5VUG0 894 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 SND1Q7KZF4 910 aaKnown RBP eCLIP28.19■■■□□ 2.1
RAB40C-201ENST00000248139 CYP2W1Q8TAV3 490 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 ALS2CR12Q96Q35 445 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 ADAMTS1Q9UHI8 967 aa28.19■■■□□ 2.1
RAB40C-201ENST00000248139 UBR3Q6ZT12 1888 aa28.18■■■□□ 2.1
RAB40C-201ENST00000248139 ARFGEF1Q9Y6D6 1849 aa28.18■■■□□ 2.1
RAB40C-201ENST00000248139 AGPSO00116 658 aa28.18■■■□□ 2.1
RAB40C-201ENST00000248139 MEIS2O14770 477 aa28.18■■■□□ 2.1
RAB40C-201ENST00000248139 IKQ13123 557 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms