RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 COA7Q96BR5 231 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 HOXA7P31268 230 aaPredicted RBP17.18■□□□□ 0.34
CTSD-201ENST00000236671 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
CTSD-201ENST00000236671 LRRC41Q15345 812 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 AOC3Q16853 763 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 HGSNATQ68CP4 663 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 RAB34Q9BZG1 259 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 EDEM3Q9BZQ6 932 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 RASSF4Q9H2L5 321 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 CD209Q9NNX6 404 aa17.18■□□□□ 0.34
CTSD-201ENST00000236671 PLIN4Q96Q06 1357 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 GOLGA6BA6NDN3 693 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 MAGEA1P43355 309 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 KCNMA1Q12791 1236 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 PSMD2Q13200 908 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 ZCWPW2Q504Y3 356 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 C10orf67Q8IYJ2 551 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 HINFPQ9BQA5 517 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 RIC8AQ9NPQ8 531 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 SMARCAL1Q9NZC9 954 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 SCN9AQ15858 1988 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 SSU72P8A0A1W2PR75 194 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 NCK2O43639 380 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 PLCG2P16885 1265 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 CXCR5P32302 372 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 GFPT1Q06210 699 aaPredicted RBP17.17■□□□□ 0.34
CTSD-201ENST00000236671 ECM1Q16610 540 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 KRT79Q5XKE5 535 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 HAUS3Q68CZ6 603 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 SND1Q7KZF4 910 aaKnown RBP eCLIP17.17■□□□□ 0.345e-34■■■■■ 32
CTSD-201ENST00000236671 CCDC155Q8N6L0 562 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 MTMR8Q96EF0 704 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 ZFP91Q96JP5 570 aaPredicted RBP17.17■□□□□ 0.34
CTSD-201ENST00000236671 PSMB7Q99436 277 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 TSG101Q99816 390 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 TLR10Q9BXR5 811 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 KCNQ5Q9NR82 932 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 EHD2Q9NZN4 543 aa17.17■□□□□ 0.34
CTSD-201ENST00000236671 RBAK-RBAKDNI3L0D1 243 aa17.16■□□□□ 0.34
CTSD-201ENST00000236671 SHOX2O60902 331 aaPredicted RBP17.16■□□□□ 0.34
CTSD-201ENST00000236671 ERCC3P19447 782 aa17.16■□□□□ 0.34
CTSD-201ENST00000236671 SLC1A4P43007 532 aa17.16■□□□□ 0.34
CTSD-201ENST00000236671 ASPRV1Q53RT3 343 aa17.16■□□□□ 0.34
CTSD-201ENST00000236671 DNAJC19Q96DA6 116 aa17.16■□□□□ 0.34
CTSD-201ENST00000236671 LRRC27Q9C0I9 530 aa17.16■□□□□ 0.34
CTSD-201ENST00000236671 SNHG28P0DPA3 235 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 IL1R1P14778 569 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 MRPS25P82663 173 aaKnown RBP17.15■□□□□ 0.34
CTSD-201ENST00000236671 DOK7Q18PE1 504 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 CACNA2D4Q7Z3S7 1137 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 MYOCDQ8IZQ8 938 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 LRRC47Q8N1G4 583 aaKnown RBP17.15■□□□□ 0.34
CTSD-201ENST00000236671 ANKRD13CQ8N6S4 541 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 FAM163AQ96GL9 167 aaPredicted RBP17.15■□□□□ 0.34
CTSD-201ENST00000236671 TAOK3Q9H2K8 898 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 DBNDD1Q9H9R9 158 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 MTMR4Q9NYA4 1195 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 GAKO14976 1311 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 PPFIA4O75335 1185 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 MATR3P43243 847 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTSD-201ENST00000236671 TNNI2P48788 182 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 SLC7A5Q01650 507 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 COASYQ13057 564 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 CCDC181Q5TID7 509 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 KLHDC7AQ5VTJ3 777 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 FAM76AQ8TAV0 307 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 NOX5Q96PH1 765 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 STIM2Q9P246 746 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 RSPH14Q9UHP6 348 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 GGA1Q9UJY5 639 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 COL4A3BPQ9Y5P4 624 aa17.15■□□□□ 0.34
CTSD-201ENST00000236671 MYH10P35580 1976 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 GOLGA6CA6NDK9 693 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 NOL4O94818 638 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 GOLGA6DP0CG33 693 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 TNFRSF8P28908 595 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 PPP4R3AQ6IN85 833 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 PPP1R18Q6NYC8 613 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 SH3GL2Q99962 352 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 TANGO6Q9C0B7 1094 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 GOLGA6AQ9NYA3 693 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 CEP72Q9P209 647 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 FOCADQ5VW36 1801 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 TLR2O60603 784 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 FKBP3Q00688 224 aaKnown RBP17.14■□□□□ 0.33
CTSD-201ENST00000236671 UBE2SQ16763 222 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 RNF10Q8N5U6 811 aaKnown RBP17.14■□□□□ 0.33
CTSD-201ENST00000236671 SYN2Q92777 582 aaPredicted RBP17.14■□□□□ 0.33
CTSD-201ENST00000236671 HAS1Q92839 578 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 PLEKHA4Q9H4M7 779 aa17.14■□□□□ 0.33
CTSD-201ENST00000236671 RBM12Q9NTZ6 932 aaKnown RBP17.14■□□□□ 0.33
CTSD-201ENST00000236671 IGKV6D-41A0A0C4DH26 115 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 BUB1O43683 1085 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 PPP1R11O60927 126 aaPredicted RBP17.13■□□□□ 0.33
CTSD-201ENST00000236671 CLK2P49760 499 aaKnown RBP17.13■□□□□ 0.33
CTSD-201ENST00000236671 EPHB4P54760 987 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 SEPT2Q15019 361 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 TDRD12Q587J7 1177 aaKnown RBP17.13■□□□□ 0.33
CTSD-201ENST00000236671 MFSD14BQ5SR56 506 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 EMBQ6PCB8 327 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms