RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 C6orf50Q9HD87 102 aa15.7■□□□□ 0.1
VEGFA-201ENST00000230480 KCNH7Q9NS40 1196 aa15.7■□□□□ 0.1
VEGFA-201ENST00000230480 POLR3EQ9NVU0 708 aa15.7■□□□□ 0.1
VEGFA-201ENST00000230480 ORC3Q9UBD5 711 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-201ENST00000230480 PCDHA4Q9UN74 947 aa15.7■□□□□ 0.1
VEGFA-201ENST00000230480 SCN5AQ14524 2016 aa15.7■□□□□ 0.1
VEGFA-201ENST00000230480 FAM205CA6NFA0 338 aa15.69■□□□□ 0.1
VEGFA-201ENST00000230480 CPLX1O14810 134 aa15.69■□□□□ 0.1
VEGFA-201ENST00000230480 PPFIA4O75335 1185 aa15.69■□□□□ 0.1
VEGFA-201ENST00000230480 F2P00734 622 aa15.69■□□□□ 0.1
VEGFA-201ENST00000230480 ZNF286BP0CG31 522 aa15.69■□□□□ 0.1
VEGFA-201ENST00000230480 CEP55Q53EZ4 464 aa15.69■□□□□ 0.1
VEGFA-201ENST00000230480 METTL7BQ6UX53 244 aa15.69■□□□□ 0.1
VEGFA-201ENST00000230480 C16orf59Q7L2K0 433 aa15.69■□□□□ 0.1
VEGFA-201ENST00000230480 REXO1Q8N1G1 1221 aaKnown RBP15.69■□□□□ 0.1
VEGFA-201ENST00000230480 SPATA33Q96N06 139 aa15.69■□□□□ 0.1
VEGFA-201ENST00000230480 UIMC1Q96RL1 719 aa15.69■□□□□ 0.1
VEGFA-201ENST00000230480 AGO4Q9HCK5 861 aaKnown RBP15.69■□□□□ 0.1
VEGFA-201ENST00000230480 TRMT13Q9NUP7 481 aaKnown RBP15.69■□□□□ 0.1
VEGFA-201ENST00000230480 WNT7AO00755 349 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 CCNE2O96020 404 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 CLTBP09497 229 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 HOXC8P31273 242 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 BMP8BP34820 402 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 MDM2Q00987 491 aaPredicted RBP15.68■□□□□ 0.1
VEGFA-201ENST00000230480 RABEP1Q15276 862 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 CCDC83Q8IWF9 413 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 TRIM22Q8IYM9 498 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 BLIDQ8IZY5 108 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 WNT8BQ93098 351 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 MBOAT7Q96N66 472 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 GLT8D2Q9H1C3 349 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 PKD2L1Q9P0L9 805 aa15.68■□□□□ 0.1
VEGFA-201ENST00000230480 ZEB2O60315 1214 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 KPNA6O60684 536 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 GNA11P29992 359 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 NLRP5P59047 1200 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 ZNF200P98182 395 aaPredicted RBP15.67■□□□□ 0.1
VEGFA-201ENST00000230480 AKAP17AQ02040 695 aaKnown RBP15.67■□□□□ 0.1
VEGFA-201ENST00000230480 MTMR1Q13613 665 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 NEDD9Q14511 834 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 GPNMBQ14956 572 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 GNPTABQ3T906 1256 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 GDF6Q6KF10 455 aaPredicted RBP15.67■□□□□ 0.1
VEGFA-201ENST00000230480 NIPA1Q7RTP0 329 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 NLRX1Q86UT6 975 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 SESTD1Q86VW0 696 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 TRIM50Q86XT4 487 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 DHX38Q92620 1227 aaKnown RBP15.67■□□□□ 0.1
VEGFA-201ENST00000230480 BADQ92934 168 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 GJA10Q969M2 543 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 KAT6AQ92794 2004 aa15.67■□□□□ 0.1
VEGFA-201ENST00000230480 SZT2Q5T011 3432 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 MAFGO15525 162 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 ATG7O95352 703 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 LGALS2P05162 132 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 CYP2C9P11712 490 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 PSEN2P49810 448 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 ADAM17P78536 824 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 DGKDQ16760 1214 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 NFRKBQ6P4R8 1299 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 CCDC148Q8NFR7 591 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 CCDC12Q8WUD4 166 aaPredicted RBP15.66■□□□□ 0.1
VEGFA-201ENST00000230480 VTI1AQ96AJ9 217 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 ALG1Q9BT22 464 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 NOC4LQ9BVI4 516 aaKnown RBP15.66■□□□□ 0.1
VEGFA-201ENST00000230480 WNT8AQ9H1J5 351 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 MLXIPQ9HAP2 919 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 HDAC6Q9UBN7 1215 aa15.66■□□□□ 0.1
VEGFA-201ENST00000230480 CYP3A7-CYP3A51PA0A087WV96 503 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 IGKV6D-21A0A0A0MT36 114 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 LGR5O75473 907 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 TDP2O95551 362 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 CYP3A7P24462 503 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 NR5A1Q13285 461 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 TRIM71Q2Q1W2 868 aaKnown RBP15.65■□□□□ 0.1
VEGFA-201ENST00000230480 CPLX2Q6PUV4 134 aaKnown RBP15.65■□□□□ 0.1
VEGFA-201ENST00000230480 TRAF7Q6Q0C0 670 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 B3GNT9Q6UX72 402 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 PLA2G4DQ86XP0 818 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 FAM177A1Q8N128 213 aaPredicted RBP15.65■□□□□ 0.1
VEGFA-201ENST00000230480 TBCKQ8TEA7 893 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 RNPEPQ9H4A4 650 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 TMEM39AQ9NV64 488 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 NFASCO94856 1347 aa15.65■□□□□ 0.1
VEGFA-201ENST00000230480 DCDC2CA8MYV0 355 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 MSH4O15457 936 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 CDKL5O76039 1030 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 TIMP1P01033 207 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 ATP4AP20648 1035 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 CYP2C18P33260 490 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 USP11P51784 963 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 MFSD10Q14728 455 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 KIAA0753Q2KHM9 967 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 C9orf50Q5SZB4 431 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 KRT40Q6A162 431 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 TMX3Q96JJ7 454 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 ZSCAN31Q96LW9 406 aaPredicted RBP15.64■□□□□ 0.09
VEGFA-201ENST00000230480 OSBPL7Q9BZF2 842 aa15.64■□□□□ 0.09
VEGFA-201ENST00000230480 PRDM5Q9NQX1 630 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms