RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 MARCH6O60337 910 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 TLR2O60603 784 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 SLC16A2P36021 539 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 MARSP56192 900 aaKnown RBP17.97■□□□□ 0.47
LTBR-201ENST00000228918 RASSF7Q02833 373 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 SLC9C1Q4G0N8 1177 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 RNF10Q8N5U6 811 aaKnown RBP17.97■□□□□ 0.47
LTBR-201ENST00000228918 NOX5Q96PH1 765 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 NLRC4Q9NPP4 1024 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 BMP2KQ9NSY1 1161 aaPredicted RBP17.97■□□□□ 0.47
LTBR-201ENST00000228918 SUGT1Q9Y2Z0 365 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 CXCR5P32302 372 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 FAM83BQ5T0W9 1011 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 KLHDC7AQ5VTJ3 777 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 ANKRD13CQ8N6S4 541 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 PSMB7Q99436 277 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 NAP1L4Q99733 375 aaKnown RBP17.97■□□□□ 0.47
LTBR-201ENST00000228918 LSM14BQ9BX40 385 aaKnown RBP17.97■□□□□ 0.47
LTBR-201ENST00000228918 PSTPIP2Q9H939 334 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 SMARCAL1Q9NZC9 954 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 EHD2Q9NZN4 543 aa17.97■□□□□ 0.47
LTBR-201ENST00000228918 E9PMD0 336 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 F8W031 263 aaPredicted RBP17.96■□□□□ 0.47
LTBR-201ENST00000228918 GNA14O95837 355 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 SERPING1P05155 500 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 SSBP05455 408 aaKnown RBP eCLIP17.96■□□□□ 0.47
LTBR-201ENST00000228918 CCDC181Q5TID7 509 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 SFMBT2Q5VUG0 894 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 HAUS3Q68CZ6 603 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 KCTD1Q719H9 257 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 TRIM59Q8IWR1 403 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 CCDC65Q8IXS2 484 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 CRAMP1Q96RY5 1269 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 TBC1D7Q9P0N9 293 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 PLA2G4BP0C869 781 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 LRRC31Q6UY01 552 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 CERS5Q8N5B7 392 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 KIAA1024Q9UPX6 916 aa17.96■□□□□ 0.47
LTBR-201ENST00000228918 POTEB3A0JP26 581 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 GOLGA6BA6NDN3 693 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 POTECB2RU33 542 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 BUB1O43683 1085 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 POTEBQ6S5H4 581 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 SND1Q7KZF4 910 aaKnown RBP eCLIP17.95■□□□□ 0.462e-6■□□□□ 10
LTBR-201ENST00000228918 SRLQ86TD4 932 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 ZC3H3Q8IXZ2 948 aaKnown RBP17.95■□□□□ 0.46
LTBR-201ENST00000228918 COA1Q9GZY4 146 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 RASSF4Q9H2L5 321 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 KCTD10Q9H3F6 313 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 EFCC1Q9HA90 598 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 TSKSQ9UJT2 592 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 SLC26A4O43511 780 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 PAFAH1B1P43034 410 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 MATR3P43243 847 aaKnown RBP eCLIP17.95■□□□□ 0.46
LTBR-201ENST00000228918 POLR2FP61218 127 aaKnown RBP17.95■□□□□ 0.46
LTBR-201ENST00000228918 GPBP1Q86WP2 473 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 NELFCDQ8IXH7 590 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 SCFD1Q8WVM8 642 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 HINFPQ9BQA5 517 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 KCNMB3Q9NPA1 279 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 USP40Q9NVE5 1235 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 STIM2Q9P246 746 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 LCMT1Q9UIC8 334 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 ATP6V0A2Q9Y487 856 aa17.95■□□□□ 0.46
LTBR-201ENST00000228918 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.95■□□□□ 0.46
LTBR-201ENST00000228918 NPHP3-ACAD11A0A0J9YXS1 232 aa17.94■□□□□ 0.46
LTBR-201ENST00000228918 CYP11B2P19099 503 aa17.94■□□□□ 0.46
LTBR-201ENST00000228918 TNFRSF8P28908 595 aa17.94■□□□□ 0.46
LTBR-201ENST00000228918 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
LTBR-201ENST00000228918 FOXR1Q6PIV2 292 aa17.94■□□□□ 0.46
LTBR-201ENST00000228918 TMC4Q7Z404 712 aa17.94■□□□□ 0.46
LTBR-201ENST00000228918 USP21Q9UK80 565 aa17.94■□□□□ 0.46
LTBR-201ENST00000228918 KIF13BQ9NQT8 1826 aa17.94■□□□□ 0.46
LTBR-201ENST00000228918 FRMD3A2A2Y4 597 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 MPHOSPH10O00566 681 aaKnown RBP17.93■□□□□ 0.46
LTBR-201ENST00000228918 RIMBP2O15034 1052 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 EPHB4P54760 987 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 SLC7A5Q01650 507 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 DDR1Q08345 913 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 GLT8D2Q9H1C3 349 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 LUC7LQ9NQ29 371 aaKnown RBP17.93■□□□□ 0.46
LTBR-201ENST00000228918 RBM12Q9NTZ6 932 aaKnown RBP17.93■□□□□ 0.46
LTBR-201ENST00000228918 USP17L15C9J2P7 530 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 USP17L13C9JLJ4 530 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 USP17L11C9JVI0 530 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 USP17L18D6R9N7 530 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 USP17L22D6RA61 530 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 USP17L17D6RBQ6 530 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 USP17L19D6RCP7 530 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 USP17L20D6RJB6 530 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 UBAP1LF5GYI3 381 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 MYO1CO00159 1063 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 PPEF1O14829 653 aaPredicted RBP17.93■□□□□ 0.46
LTBR-201ENST00000228918 MRPS25P82663 173 aaKnown RBP17.93■□□□□ 0.46
LTBR-201ENST00000228918 USP17L24Q0WX57 530 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 HERC4Q5GLZ8 1057 aaPredicted RBP17.93■□□□□ 0.46
LTBR-201ENST00000228918 C8orf74Q6P047 294 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 USP17L6PQ6QN14 398 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 MBOAT7Q96N66 472 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 ANO3Q9BYT9 981 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms