RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Eef2kO08796 724 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 C2cd5Q7TPS5 1016 aaKnown RBP15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Ccz1Q8C1Y8 480 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Rrp1bQ91YK2 724 aaKnown RBP15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Ciao1Q99KN2 339 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Snx24Q9CRB0 169 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 ErmapQ9JLN5 566 aa15.06■□□□□ 0
Col3a1-201ENSMUST00000087883 Mast1Q9R1L5 1570 aa15.05■□□□□ 0
Col3a1-201ENSMUST00000087883 Gm29133A0A1B0GT72 266 aa15.05■□□□□ 0
Col3a1-201ENSMUST00000087883 Flot1O08917 428 aa15.05■□□□□ 0
Col3a1-201ENSMUST00000087883 Pla2g4aP47713 748 aa15.05■□□□□ 0
Col3a1-201ENSMUST00000087883 Uhmk1P97343 419 aa15.05■□□□□ 0
Col3a1-201ENSMUST00000087883 TfrcQ62351 763 aaKnown RBP15.05■□□□□ 0
Col3a1-201ENSMUST00000087883 Dnajc3Q91YW3 504 aa15.05■□□□□ 0
Col3a1-201ENSMUST00000087883 Zmynd8A2A484 1235 aaKnown RBP15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Tcp11x2A2AEI7 503 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Pde8bE9Q4S1 865 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Mapk6Q61532 720 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 AmphQ7TQF7 686 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Mknk2Q8CDB0 459 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Psmd2Q8VDM4 908 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Ttc17E9PVB5 1198 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Cacna2d1O08532 1103 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Adssl1P28650 457 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Idi1P58044 227 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Dach2Q925Q8 634 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Plxnc1Q9QZC2 1574 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Hps5P59438 1126 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 MagohP61327 146 aaKnown RBP15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Rasgrf2P70392 1189 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Ulk3Q3U3Q1 472 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 PzpQ61838 1495 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Krt32Q62168 407 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Zfp317Q8C0Q5 607 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 StrbpQ91WM1 672 aaKnown RBP15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 MagohbQ9CQL1 146 aa15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Nup160Q9Z0W3 1402 aaKnown RBP15.05■□□□□ -0
Col3a1-201ENSMUST00000087883 Cyp11b2P15539 500 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Q3KNL4 93 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Trim43aQ3TL54 445 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Ccdc154Q6RUT8 657 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 TwistnbQ78WZ7 330 aaKnown RBP15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Morf4l2Q9R0Q4 288 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Plekhg1F6S200 1446 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Gm15262A0A140LIQ5 728 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 DffaO54786 331 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Tac1P41539 130 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Krt26Q3TRJ4 462 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Hic2Q9JLZ6 619 aaKnown RBP15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Kdm5cP41230 1554 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Myl1P05977 188 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Gm1604bQ3TRG0 118 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 6820408C15RikQ8BJX2 354 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 SmtnQ921U8 923 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Serpinb8O08800 374 aaKnown RBP15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Gpr182P43142 395 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Dynll1P63168 89 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Ahcyl2Q68FL4 613 aaKnown RBP15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Snx19Q6P4T1 997 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 MtbpQ8BJS8 894 aaKnown RBP15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Ppm1kQ8BXN7 372 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Prpf3Q922U1 683 aaKnown RBP15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Tgs1Q923W1 853 aa15.04■□□□□ -0
Col3a1-201ENSMUST00000087883 Per2O54943 1257 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Pja1O55176 578 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Stat4P42228 749 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Kctd1Q5M956 257 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Dclk2Q6PGN3 756 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Fam161bQ8CB59 589 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Creld2Q9CYA0 350 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Kif9Q9WV04 790 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Crlf3Q9Z2L7 442 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 AatkQ80YE4 1365 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Alox15P39654 663 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Dpcr1Q3TNW5 500 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Parp3Q3ULW8 533 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Eif3cQ8R1B4 911 aaKnown RBP15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Zmat2Q9CPW7 199 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Pramef12Q9D2F1 463 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Telo2Q9DC40 840 aaKnown RBP15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Dusp10Q9ESS0 483 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Abcc1O35379 1528 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Gli2Q0VGT2 1544 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Iqcj-Schip1A0A088MLT8 559 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Schip1P0DPB4 484 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Recql4Q75NR7 1216 aaKnown RBP15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Pdik1lQ8QZR7 341 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Gm6657A0A1B0GRJ3 277 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 IkbkbO88351 757 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Sept2P42208 361 aaKnown RBP15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Arl4aP61213 200 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 BcrQ6PAJ1 1270 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Hps6Q8BLY7 805 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Daam1Q8BPM0 1077 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Rfx6Q8C7R7 927 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Hdac11Q91WA3 347 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Afg3l1Q920A7 789 aaKnown RBP15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Pbrm1Q8BSQ9 1634 aaKnown RBP15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Ess2O70279 479 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Trim38Q5SZ99 471 aa15.03■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms