RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 NxnP97346 435 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Smarcad1Q04692 1021 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Nop9Q8BMC4 636 aaKnown RBP18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ccdc15Q8C9M2 810 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Spdl1Q923A2 608 aa18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Noc2lQ9WV70 747 aaKnown RBP18.07■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ano3A2AHL1 981 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Spata18Q0P557 537 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Serpinb3dQ6UKZ0 387 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Stambpl1Q76N33 436 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Sec63Q8VHE0 760 aaKnown RBP18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Eaf2Q91ZD6 262 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 St13Q99L47 371 aaKnown RBP18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ahdc1Q6PAL7 1594 aaKnown RBP18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Scgb2b7D3YYY1 112 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Raph1F2Z3U3 1266 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 GsnP13020 780 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Xrcc5P27641 732 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Lins1Q3U1D0 764 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Nab2Q61127 525 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Anks1bQ8BIZ1 1259 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Aox4Q3TYQ9 1336 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Gm1141B9EJU1 475 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Iqgap3F8VQ29 1632 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Prr5lA2AVJ5 370 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 NppbP40753 121 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Gsdmc4Q3TR54 480 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Kdm7aQ3UWM4 940 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Olfm4Q3UZZ4 505 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Snx25Q3ZT31 840 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Sec23ipQ6NZC7 998 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ankrd23Q812A3 306 aa18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ddx24Q9ESV0 857 aaKnown RBP18.06■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Cyfip2Q5SQX6 1253 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Irak1Q62406 710 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 PudpQ9D5U5 234 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Stk39Q9Z1W9 556 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Krt18P05784 423 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 IvlP48997 467 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Gpr139Q80UC8 345 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Cabcoco1Q8CDT7 208 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Tpd52Q62393 224 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 N4bp3Q8C7U1 537 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 HibadhQ99L13 335 aaKnown RBP18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Cog1Q9Z160 980 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Chil3O35744 398 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Pbxip1Q3TVI8 727 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Tmcc1Q69ZZ6 649 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Atp2b4Q6Q477 1205 aa18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Yars2Q8BYL4 472 aaKnown RBP18.05■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Tmem2Q5FWI3 1383 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Vmn2r68L7N2B3 851 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Copb2O55029 905 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Gfpt1P47856 697 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Polr2fP61219 127 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Acot10Q32MW3 439 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Mtrf1lQ8BJU9 373 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Fam84aQ9D650 292 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Cxcl11Q9JHH5 100 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Atp6v0a1Q9Z1G4 839 aaKnown RBP18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Rab34Q64008 259 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Dpp8Q80YA7 892 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Tdrd7Q8K1H1 1086 aaKnown RBP18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Apopt1Q9CQW7 192 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Mei1Q9D4I2 1268 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Gpaa1Q9WTK3 621 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Gipc1Q9Z0G0 333 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Nr1i2O54915 431 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Tlk2O55047 718 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Sval3Q76I99 144 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Lrriq4A6H6A4 596 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Pde9aO70628 534 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ap1m1P35585 423 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Atp4aQ64436 1033 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Sh2d4aQ9D7V1 421 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ccdc62E9PVD1 701 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Kif23E9Q5G3 953 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Trappc10Q3TLI0 1259 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Islr2Q5RKR3 745 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Parp10Q8CIE4 960 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Pgm1Q9D0F9 562 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Nlrp5Q9R1M5 1163 aa18.04■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Cdhr2E9Q7P9 1308 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Krt13P08730 437 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Fdx1P46656 188 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Ddx3yQ62095 658 aaKnown RBP18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Caps2Q8BUG5 550 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Rps6ka2Q9WUT3 733 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Gdf11Q9Z1W4 405 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 ShprhQ7TPQ3 1674 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Dhx40Q6PE54 779 aaKnown RBP18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 EpgnQ924X1 152 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 MypnQ5DTJ9 1315 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Simc1E9Q6E9 1354 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Fkbp3Q62446 224 aaKnown RBP18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Galnt17Q7TT15 598 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 FibpQ9JI19 357 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Zfp839E9PUU5 921 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Cyth3O08967 399 aa18.03■□□□□ 0.48
Col17a1-201ENSMUST00000026045 Klc1O88447 541 aa18.03■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms