RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	TRE1	Q08919	783 aa		4.77	□□□□□ -1.65
PXA1	YPL147W	GUP2	Q08929	609 aa		4.77	□□□□□ -1.65
PXA1	YPL147W	GRE1	Q08969	168 aa		4.77	□□□□□ -1.65
PXA1	YPL147W	YPR022C	Q12139	1133 aa		4.77	□□□□□ -1.65
PXA1	YPL147W	ATP2	P00830	511 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	SWI5	P08153	709 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	LPD1	P09624	499 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	RPL1A	P0CX43	217 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	RPL1B	P0CX44	217 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	ATP12	P22135	325 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	CHA1	P25379	360 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	PCL2	P25693	308 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	MSS1	P32559	526 aa	Predicted RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	SHM1	P37292	490 aa	Predicted RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	REG2	P38232	338 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	URA8	P38627	578 aa	Predicted RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	IMD2	P38697	523 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	LEU5	P38702	357 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	CCT2	P39076	527 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	ERG10	P41338	398 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	NMD5	P46970	1048 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	CTF18	P49956	741 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	RHO5	P53879	331 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	ENT5	Q03769	411 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	NCA2	Q12374	616 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	CBP6	P07253	162 aa	Predicted RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	YGL041W-A	P0C5N3	154 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	CLN3	P13365	580 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	SWI4	P25302	1093 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	YCP4	P25349	247 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	LAC1	P28496	418 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	FAA1	P30624	700 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	SPP381	P38282	291 aa	Predicted RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	TRM5	P38793	499 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	ORC6	P38826	435 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	INP51	P40559	946 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	VMA13	P41807	478 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	PUS4	P48567	403 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	YNL143C	P53908	130 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	TIM44	Q01852	431 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	NHP10	Q03435	203 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	UAF30	Q08747	228 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	CSM4	Q08955	156 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	HBN1	Q96VH4	193 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	LYS2	P07702	1392 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	COS2	P0CX12	379 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	COS3	P0CX13	379 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	PCT1	P13259	424 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	FRS2	P15625	503 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	SLY41	P22215	453 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	RIT1	P23796	513 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	KIP1	P28742	1111 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	LIP5	P32875	414 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	AIM29	P36154	155 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	PTC7	P38797	343 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	SMF1	P38925	575 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	CAK1	P43568	368 aa	Predicted RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	DID2	P69771	204 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	YDR444W	Q04093	687 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	YLR225C	Q05948	407 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	ECM22	Q05958	814 aa	Predicted RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	MHR1	Q06630	226 aa		4.76	□□□□□ -1.65
PXA1	YPL147W	GRE2	Q12068	342 aa	Known RBP	4.76	□□□□□ -1.65
PXA1	YPL147W	CDC33	P07260	213 aa	Known RBP	4.75	□□□□□ -1.65
PXA1	YPL147W	GPA2	P10823	449 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	PMR1	P13586	950 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	STE18	P18852	110 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	PHA2	P32452	334 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	SPS19	P32573	292 aa	Known RBP	4.75	□□□□□ -1.65
PXA1	YPL147W	RML2	P32611	393 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	RPS1A	P33442	255 aa	Known RBP	4.75	□□□□□ -1.65
PXA1	YPL147W	QNS1	P38795	714 aa	Known RBP	4.75	□□□□□ -1.65
PXA1	YPL147W	FET3	P38993	636 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	DDI1	P40087	428 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	YJL163C	P46996	555 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	RPA34	P47006	233 aa	Predicted RBP	4.75	□□□□□ -1.65
PXA1	YPL147W	NAS6	P50086	228 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	HAP5	Q02516	242 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	FIN1	Q03898	291 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	RUB1	Q03919	77 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	ADY4	Q05955	493 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	IWR1	Q07532	353 aa	Predicted RBP	4.75	□□□□□ -1.65
PXA1	YPL147W	YLR053C	Q12026	108 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	TDH2	P00358	332 aa	Known RBP	4.75	□□□□□ -1.65
PXA1	YPL147W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
PXA1	YPL147W	CDC21	P06785	304 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	CNB1	P25296	175 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	RNA14	P25298	677 aa	Known RBP	4.75	□□□□□ -1.65
PXA1	YPL147W	FUN26	P31381	517 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	NDI1	P32340	513 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	DOA1	P36037	715 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	CDC27	P38042	758 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	PFF1	P38244	976 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	STB5	P38699	743 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	YKE4	P40544	346 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	IDS2	P46958	469 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	YGL185C	P53100	379 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	YGL108C	P53139	140 aa		4.75	□□□□□ -1.65
PXA1	YPL147W	YGL036W	P53185	909 aa	Predicted RBP	4.75	□□□□□ -1.65
PXA1	YPL147W	YGR017W	P53210	297 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms