RNA–Protein interactions for RNA: YPL135W

ISU1, Transcript of Conserved protein of the mitochondrial matrix, yeast

Gene ISU1, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISU1	YPL135W	DAL80	P26343	269 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	PAP1	P29468	568 aa	Known RBP	2.6	□□□□□ -1.99
ISU1	YPL135W	MCM4	P30665	933 aa	Known RBP	2.6	□□□□□ -1.99
ISU1	YPL135W	NIP1	P32497	812 aa	Known RBP	2.6	□□□□□ -1.99
ISU1	YPL135W	MRE11	P32829	692 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	PPQ1	P32945	549 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	SUR1	P33300	382 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	LTV1	P34078	463 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	MIC60	P36112	540 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	OTU2	P38747	307 aa	Known RBP	2.6	□□□□□ -1.99
ISU1	YPL135W	YHR054C	P38780	354 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	YHR131C	P38835	850 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	TIF4631	P39935	952 aa	Known RBP	2.6	□□□□□ -1.99
ISU1	YPL135W	SNG1	P46950	547 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	MDV1	P47025	714 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	SHE4	P51534	789 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	PDR16	P53860	351 aa	Known RBP	2.6	□□□□□ -1.99
ISU1	YPL135W	ALF1	P53904	254 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	BOP3	P53958	396 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	YPL014W	Q02606	381 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	SMA1	Q02651	245 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	CSI1	Q04368	295 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	RNH1	Q04740	348 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	DON1	Q05610	365 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	DBP9	Q06218	594 aa	Known RBP	2.6	□□□□□ -1.99
ISU1	YPL135W	ATG29	Q12092	213 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	NCE102	Q12207	173 aa	RIP-Chip data	2.6	□□□□□ -1.99	not detected
ISU1	YPL135W	LYS2	P07702	1392 aa		2.6	□□□□□ -1.99
ISU1	YPL135W	YPT1	P01123	206 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	RNR2	P09938	399 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	YML002W	P0CF17	737 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	RPL3	P14126	387 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	OM45	P16547	393 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	DAP2	P18962	818 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	DBP3	P20447	523 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	PHO84	P25297	587 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	RPS2	P25443	254 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	MGR1	P25573	417 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	SPC110	P32380	944 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	CMC1	P36064	111 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	THI2	P38141	450 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	YSW1	P38280	609 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	RRT2	P38332	387 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	PHO90	P39535	881 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	OSW5	P40219	148 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	STB2	P46679	850 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	DLD2	P46681	530 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	AIM22	P47051	409 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	TWF1	P53250	332 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	YGR111W	P53265	400 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	SCW4	P53334	386 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	TOF2	Q02208	771 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	SHR3	Q02774	210 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	KAP120	Q02932	1032 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	YMR160W	Q03823	816 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	FIN1	Q03898	291 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	VPS20	Q04272	221 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	RBA50	Q04418	439 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	MRPL1	Q04599	285 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	YMR034C	Q05131	434 aa	Predicted RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	HEL2	Q05580	639 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	RBS1	Q05672	457 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	DIC1	Q06143	298 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	PML1	Q07930	204 aa	Predicted RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	GEP3	Q08622	556 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	UAF30	Q08747	228 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	RTC5	Q12108	567 aa	Known RBP	2.59	□□□□□ -1.99
ISU1	YPL135W	BSC1	Q12140	328 aa		2.59	□□□□□ -1.99
ISU1	YPL135W	FKS3	Q04952	1785 aa		2.59	□□□□□ -2
ISU1	YPL135W	COR1	P07256	457 aa		2.58	□□□□□ -2
ISU1	YPL135W	PEP4	P07267	405 aa	Known RBP	2.58	□□□□□ -2
ISU1	YPL135W	RPS24A	P0CX31	135 aa	Known RBP	2.58	□□□□□ -2
ISU1	YPL135W	RPS24B	P0CX32	135 aa	Known RBP	2.58	□□□□□ -2
ISU1	YPL135W	PPH22	P23595	377 aa		2.58	□□□□□ -2
ISU1	YPL135W	SSE1	P32589	693 aa	Known RBP	2.58	□□□□□ -2
ISU1	YPL135W	YKL023W	P36103	277 aa	Known RBP	2.58	□□□□□ -2
ISU1	YPL135W	PIM1	P36775	1133 aa		2.58	□□□□□ -2
ISU1	YPL135W	YPK3	P38070	525 aa		2.58	□□□□□ -2
ISU1	YPL135W	ERG7	P38604	731 aa		2.58	□□□□□ -2
ISU1	YPL135W	LAG1	P38703	411 aa		2.58	□□□□□ -2
ISU1	YPL135W	RSM25	P40496	264 aa		2.58	□□□□□ -2
ISU1	YPL135W	PCI8	P40512	444 aa		2.58	□□□□□ -2
ISU1	YPL135W	MKT1	P40850	830 aa	Known RBP	2.58	□□□□□ -2
ISU1	YPL135W	RTS2	P40962	232 aa		2.58	□□□□□ -2
ISU1	YPL135W	GCD10	P41814	478 aa		2.58	□□□□□ -2
ISU1	YPL135W	HXT14	P42833	540 aa		2.58	□□□□□ -2
ISU1	YPL135W	AIP1	P46680	615 aa	Known RBP	2.58	□□□□□ -2
ISU1	YPL135W	ALT2	P52892	507 aa		2.58	□□□□□ -2
ISU1	YPL135W	SHE10	P53075	577 aa		2.58	□□□□□ -2
ISU1	YPL135W	MLC1	P53141	149 aa		2.58	□□□□□ -2
ISU1	YPL135W	DRN1	P53255	507 aa	Known RBP	2.58	□□□□□ -2
ISU1	YPL135W	YNL181W	P53878	407 aa		2.58	□□□□□ -2
ISU1	YPL135W	DIG1	Q03063	452 aa	Known RBP	2.58	□□□□□ -2
ISU1	YPL135W	YDR415C	Q04033	374 aa	Predicted RBP	2.58	□□□□□ -2
ISU1	YPL135W	ECI1	Q05871	280 aa		2.58	□□□□□ -2
ISU1	YPL135W	YLR456W	Q06199	204 aa		2.58	□□□□□ -2
ISU1	YPL135W	VTA1	Q06263	330 aa		2.58	□□□□□ -2
ISU1	YPL135W	PHO92	Q06390	306 aa		2.58	□□□□□ -2
ISU1	YPL135W	SSK1	Q07084	712 aa		2.58	□□□□□ -2
ISU1	YPL135W	SNA4	Q07549	140 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms