RNA–Protein interactions for RNA: YPL124W

SPC29, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC29, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC29YPL124W POP5P28005 173 aa2.38□□□□□ -2.03
SPC29YPL124W GYP6P32806 458 aa2.38□□□□□ -2.03
SPC29YPL124W CBP4P37267 147 aa2.38□□□□□ -2.03
SPC29YPL124W THI2P38141 450 aa2.38□□□□□ -2.03
SPC29YPL124W YGR066CP53242 292 aa2.38□□□□□ -2.03
SPC29YPL124W NCS2P53923 493 aaPredicted RBP2.38□□□□□ -2.03
SPC29YPL124W PRB1P09232 635 aa2.37□□□□□ -2.03
SPC29YPL124W MUD2P36084 527 aaKnown RBP2.37□□□□□ -2.03
SPC29YPL124W BMT2P38278 337 aa2.37□□□□□ -2.03
SPC29YPL124W PCP1P53259 346 aa2.37□□□□□ -2.03
SPC29YPL124W IES4Q08561 116 aa2.37□□□□□ -2.03
SPC29YPL124W SEC39Q12745 709 aa2.37□□□□□ -2.03
SPC29YPL124W SEC53P07283 254 aaKnown RBP2.36□□□□□ -2.03
SPC29YPL124W DFR1P07807 211 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SPC29YPL124W SLY1P22213 666 aa2.36□□□□□ -2.03
SPC29YPL124W ECM25P32525 599 aa2.36□□□□□ -2.03
SPC29YPL124W NPL6P32832 435 aa2.36□□□□□ -2.03
SPC29YPL124W CSE2P33308 149 aa2.36□□□□□ -2.03
SPC29YPL124W CCT2P39076 527 aaKnown RBP2.36□□□□□ -2.03
SPC29YPL124W AIM10P39965 576 aaKnown RBP2.36□□□□□ -2.03
SPC29YPL124W TFG2P41896 400 aaPredicted RBP2.36□□□□□ -2.03
SPC29YPL124W YNR048WP53740 393 aa2.36□□□□□ -2.03
SPC29YPL124W YDR239CQ03780 787 aa2.36□□□□□ -2.03
SPC29YPL124W SNX3Q08826 162 aaKnown RBP2.36□□□□□ -2.03
SPC29YPL124W SEO1P39709 593 aa2.35□□□□□ -2.03
SPC29YPL124W PET130P47065 347 aa2.35□□□□□ -2.03
SPC29YPL124W MRX6P48564 524 aa2.35□□□□□ -2.03
SPC29YPL124W KTR5P53966 522 aaPredicted RBP2.35□□□□□ -2.03
SPC29YPL124W SUB1P54000 292 aaKnown RBP2.35□□□□□ -2.03
SPC29YPL124W VHS1Q03785 461 aa2.35□□□□□ -2.03
SPC29YPL124W CTI6Q08923 506 aa2.35□□□□□ -2.03
SPC29YPL124W RCN2Q12044 265 aa2.35□□□□□ -2.03
SPC29YPL124W RTP1Q12751 981 aa2.35□□□□□ -2.03
SPC29YPL124W BI3Q9ZZW7 517 aa2.35□□□□□ -2.03
SPC29YPL124W SEM1O94742 89 aa2.34□□□□□ -2.03
SPC29YPL124W RHO2P06781 192 aa2.34□□□□□ -2.03
SPC29YPL124W MUD1P32605 298 aaKnown RBP2.34□□□□□ -2.03
SPC29YPL124W NOP4P37838 685 aaKnown RBP2.34□□□□□ -2.03
SPC29YPL124W REG2P38232 338 aa2.34□□□□□ -2.03
SPC29YPL124W VMA13P41807 478 aaKnown RBP2.34□□□□□ -2.03
SPC29YPL124W CBS1P14066 229 aa2.33□□□□□ -2.04
SPC29YPL124W MCM10P32354 571 aa2.33□□□□□ -2.04
SPC29YPL124W YKL097CP34245 136 aa2.33□□□□□ -2.04
SPC29YPL124W MET28P40573 187 aa2.33□□□□□ -2.04
SPC29YPL124W FRE4P53746 719 aa2.33□□□□□ -2.04
SPC29YPL124W PRP21P32524 280 aaPredicted RBP2.32□□□□□ -2.04
SPC29YPL124W MIG3P39943 394 aa2.32□□□□□ -2.04
SPC29YPL124W NOP16P40007 231 aaKnown RBP2.32□□□□□ -2.04
SPC29YPL124W CHS6P40955 746 aa2.32□□□□□ -2.04
SPC29YPL124W ECM27P47144 725 aa2.32□□□□□ -2.04
SPC29YPL124W YDR387CQ04162 555 aa2.32□□□□□ -2.04
SPC29YPL124W YPQ1Q12010 308 aa2.32□□□□□ -2.04
SPC29YPL124W AHC1Q12433 566 aa2.32□□□□□ -2.04
SPC29YPL124W TEF1P02994 458 aaKnown RBP2.31□□□□□ -2.04
SPC29YPL124W OLE1P21147 510 aaKnown RBP2.31□□□□□ -2.04
SPC29YPL124W SWE1P32944 819 aa2.31□□□□□ -2.04
SPC29YPL124W SEC66P33754 206 aa2.31□□□□□ -2.04
SPC29YPL124W CHK1P38147 527 aa2.31□□□□□ -2.04
SPC29YPL124W NAB3P38996 802 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SPC29YPL124W DSL1P53847 754 aa2.31□□□□□ -2.04
SPC29YPL124W HSP31Q04432 237 aa2.31□□□□□ -2.04
SPC29YPL124W ORT1Q12375 292 aa2.31□□□□□ -2.04
SPC29YPL124W IZH2Q12442 317 aa2.31□□□□□ -2.04
SPC29YPL124W HIS4P00815 799 aaKnown RBP2.3□□□□□ -2.04
SPC29YPL124W ARG4P04076 463 aaPredicted RBP2.3□□□□□ -2.04
SPC29YPL124W SNT1P25357 1226 aa2.3□□□□□ -2.04
SPC29YPL124W RAD14P28519 371 aa2.3□□□□□ -2.04
SPC29YPL124W REC114P32841 428 aa2.3□□□□□ -2.04
SPC29YPL124W ARA1P38115 344 aa2.3□□□□□ -2.04
SPC29YPL124W LYS1P38998 373 aaRIP-Chip data2.3□□□□□ -2.04not detected
SPC29YPL124W UPF3P48412 387 aaKnown RBP2.3□□□□□ -2.04
SPC29YPL124W RMD9P53140 646 aaKnown RBP2.3□□□□□ -2.04
SPC29YPL124W ARE2P53629 642 aaKnown RBP2.3□□□□□ -2.04
SPC29YPL124W VPS72Q03388 795 aa2.3□□□□□ -2.04
SPC29YPL124W SYF1Q04048 859 aaPredicted RBP2.3□□□□□ -2.04
SPC29YPL124W ECM11Q04110 302 aa2.3□□□□□ -2.04
SPC29YPL124W BUD21Q08492 214 aaPredicted RBP2.3□□□□□ -2.04
SPC29YPL124W RMD5Q12508 421 aa2.3□□□□□ -2.04
SPC29YPL124W FOB1O13329 566 aa2.29□□□□□ -2.04
SPC29YPL124W SPB1P25582 841 aaPredicted RBP2.29□□□□□ -2.04
SPC29YPL124W AFG1P32317 509 aa2.29□□□□□ -2.04
SPC29YPL124W NIP100P33420 868 aa2.29□□□□□ -2.04
SPC29YPL124W SPT10P35208 640 aa2.29□□□□□ -2.04
SPC29YPL124W MRPS9P38120 278 aa2.29□□□□□ -2.04
SPC29YPL124W DFG10P40526 253 aa2.29□□□□□ -2.04
SPC29YPL124W MDE1P47095 244 aa2.29□□□□□ -2.04
SPC29YPL124W YGR149WP48236 432 aa2.29□□□□□ -2.04
SPC29YPL124W TWF1P53250 332 aa2.29□□□□□ -2.04
SPC29YPL124W VPS75P53853 264 aa2.29□□□□□ -2.04
SPC29YPL124W SGT1Q08446 395 aa2.29□□□□□ -2.04
SPC29YPL124W YRM1Q12340 786 aa2.29□□□□□ -2.04
SPC29YPL124W ENT1Q12518 454 aa2.29□□□□□ -2.04
SPC29YPL124W SEC63P14906 663 aa2.28□□□□□ -2.04
SPC29YPL124W APE2P32454 952 aaKnown RBP2.28□□□□□ -2.04
SPC29YPL124W YEL057CP39983 233 aa2.28□□□□□ -2.04
SPC29YPL124W VID27P40157 782 aa2.28□□□□□ -2.04
SPC29YPL124W JLP2P40206 208 aa2.28□□□□□ -2.04
SPC29YPL124W YDR056CQ12025 205 aa2.28□□□□□ -2.04
SPC29YPL124W IMP2'P32351 346 aa2.27□□□□□ -2.05
SPC29YPL124W HIR2P32480 875 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms