RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W ISN1Q99312 450 aa3.67□□□□□ -1.82
ABP140YOR239W CDC28P00546 298 aaKnown RBP3.66□□□□□ -1.82
ABP140YOR239W ATP4P05626 244 aa3.66□□□□□ -1.82
ABP140YOR239W FBP1P09201 348 aa3.66□□□□□ -1.82
ABP140YOR239W MRP1P10662 321 aaKnown RBP3.66□□□□□ -1.82
ABP140YOR239W YPK2P18961 677 aa3.66□□□□□ -1.82
ABP140YOR239W DAL81P21657 970 aa3.66□□□□□ -1.82
ABP140YOR239W RPL24BP24000 155 aaKnown RBP3.66□□□□□ -1.82
ABP140YOR239W RNA15P25299 296 aaPredicted RBP3.66□□□□□ -1.82
ABP140YOR239W CDC50P25656 391 aa3.66□□□□□ -1.82
ABP140YOR239W MGT1P26188 188 aa3.66□□□□□ -1.82
ABP140YOR239W UGA4P32837 571 aa3.66□□□□□ -1.82
ABP140YOR239W KAE1P36132 386 aa3.66□□□□□ -1.82
ABP140YOR239W YBR241CP38142 488 aa3.66□□□□□ -1.82
ABP140YOR239W AVT5P38176 459 aa3.66□□□□□ -1.82
ABP140YOR239W MSC7P38694 644 aa3.66□□□□□ -1.82
ABP140YOR239W YAP1801P38856 637 aa3.66□□□□□ -1.82
ABP140YOR239W POP2P39008 433 aa3.66□□□□□ -1.82
ABP140YOR239W UBP5P39944 805 aa3.66□□□□□ -1.82
ABP140YOR239W TOS3P43637 560 aa3.66□□□□□ -1.82
ABP140YOR239W ARC1P46672 376 aaKnown RBP3.66□□□□□ -1.82
ABP140YOR239W CTR1P49573 406 aa3.66□□□□□ -1.82
ABP140YOR239W GPI1P53306 609 aa3.66□□□□□ -1.82
ABP140YOR239W RNH70P53331 553 aa3.66□□□□□ -1.82
ABP140YOR239W HOL1P53389 586 aa3.66□□□□□ -1.82
ABP140YOR239W RCF2P53721 224 aa3.66□□□□□ -1.82
ABP140YOR239W PEX13P80667 386 aa3.66□□□□□ -1.82
ABP140YOR239W RTT103Q05543 409 aa3.66□□□□□ -1.82
ABP140YOR239W YLR283WQ05867 314 aa3.66□□□□□ -1.82
ABP140YOR239W YET3Q07451 203 aa3.66□□□□□ -1.82
ABP140YOR239W HBT1Q07653 1046 aaKnown RBP3.66□□□□□ -1.82
ABP140YOR239W AAD15Q08361 143 aa3.66□□□□□ -1.82
ABP140YOR239W REC8Q12188 680 aa3.66□□□□□ -1.82
ABP140YOR239W TRM10Q12400 293 aa3.66□□□□□ -1.82
ABP140YOR239W AHC1Q12433 566 aa3.66□□□□□ -1.82
ABP140YOR239W ECM3Q99252 613 aa3.66□□□□□ -1.82
ABP140YOR239W STE2D6VTK4 431 aa3.65□□□□□ -1.82
ABP140YOR239W BCY1P07278 416 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W RPC40P07703 335 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W MSS18P08593 268 aa3.65□□□□□ -1.82
ABP140YOR239W SPS4P09937 338 aa3.65□□□□□ -1.82
ABP140YOR239W COS2P0CX12 379 aa3.65□□□□□ -1.82
ABP140YOR239W COS3P0CX13 379 aa3.65□□□□□ -1.82
ABP140YOR239W RPS18AP0CX55 146 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W RPS18BP0CX56 146 aaPredicted RBP3.65□□□□□ -1.82
ABP140YOR239W ENA1P13587 1091 aa3.65□□□□□ -1.82
ABP140YOR239W PET9P18239 318 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W SEC62P21825 274 aa3.65□□□□□ -1.82
ABP140YOR239W ATP7P30902 174 aa3.65□□□□□ -1.82
ABP140YOR239W CDC12P32468 407 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W RGT1P32862 1170 aa3.65□□□□□ -1.82
ABP140YOR239W RPT3P33298 428 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W OAR1P35731 278 aa3.65□□□□□ -1.82
ABP140YOR239W DHR2P36009 735 aaPredicted RBP3.65□□□□□ -1.82
ABP140YOR239W SHM2P37291 469 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W POL12P38121 705 aaPredicted RBP3.65□□□□□ -1.82
ABP140YOR239W RIM2P38127 377 aa3.65□□□□□ -1.82
ABP140YOR239W ECM8P38246 354 aa3.65□□□□□ -1.82
ABP140YOR239W MMS4P38257 691 aa3.65□□□□□ -1.82
ABP140YOR239W PEX32P38292 413 aa3.65□□□□□ -1.82
ABP140YOR239W SSH1P38353 490 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W CBR1P38626 284 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W RRP3P38712 501 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W ARN2P38724 620 aa3.65□□□□□ -1.82
ABP140YOR239W NSG1P38837 291 aa3.65□□□□□ -1.82
ABP140YOR239W IPT1P38954 527 aa3.65□□□□□ -1.82
ABP140YOR239W RPN3P40016 523 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W RGI1P40043 161 aaPredicted RBP3.65□□□□□ -1.82
ABP140YOR239W PAC10P48363 199 aa3.65□□□□□ -1.82
ABP140YOR239W LYS20P48570 428 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W MRH4P53166 561 aa3.65□□□□□ -1.82
ABP140YOR239W PEX8P53248 589 aa3.65□□□□□ -1.82
ABP140YOR239W LSB1P53281 241 aa3.65□□□□□ -1.82
ABP140YOR239W NRD1P53617 575 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
ABP140YOR239W PRM1P53835 661 aa3.65□□□□□ -1.82
ABP140YOR239W HXT11P54862 567 aa3.65□□□□□ -1.82
ABP140YOR239W TIM44Q01852 431 aa3.65□□□□□ -1.82
ABP140YOR239W ENA2Q01896 1091 aa3.65□□□□□ -1.82
ABP140YOR239W MRPS16Q02608 121 aa3.65□□□□□ -1.82
ABP140YOR239W YPL108WQ02872 168 aaPredicted RBP3.65□□□□□ -1.82
ABP140YOR239W EFR3Q03653 782 aaKnown RBP3.65□□□□□ -1.82
ABP140YOR239W OST6Q03723 332 aa3.65□□□□□ -1.82
ABP140YOR239W SMA2Q04658 369 aa3.65□□□□□ -1.82
ABP140YOR239W BCH1Q05029 724 aa3.65□□□□□ -1.82
ABP140YOR239W YLR224WQ05947 369 aa3.65□□□□□ -1.82
ABP140YOR239W ADY4Q05955 493 aa3.65□□□□□ -1.82
ABP140YOR239W GAS2Q06135 555 aa3.65□□□□□ -1.82
ABP140YOR239W BOP2Q06150 570 aa3.65□□□□□ -1.82
ABP140YOR239W TFC6Q06339 672 aa3.65□□□□□ -1.82
ABP140YOR239W SNA4Q07549 140 aa3.65□□□□□ -1.82
ABP140YOR239W BDS1Q08347 646 aa3.65□□□□□ -1.82
ABP140YOR239W ENV7Q12003 364 aa3.65□□□□□ -1.82
ABP140YOR239W ATX2Q12067 313 aa3.65□□□□□ -1.82
ABP140YOR239W YOR022CQ12204 715 aa3.65□□□□□ -1.82
ABP140YOR239W MED1Q12321 566 aa3.65□□□□□ -1.82
ABP140YOR239W ENA5Q12691 1091 aa3.65□□□□□ -1.82
ABP140YOR239W YOR019WQ99248 730 aa3.65□□□□□ -1.82
ABP140YOR239W FKS3Q04952 1785 aa3.65□□□□□ -1.83
ABP140YOR239W CET1O13297 549 aaPredicted RBP3.64□□□□□ -1.83
ABP140YOR239W HIS5P07172 385 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms