RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeastyeast

Gene RPB8, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB8YOR224C YOX1P34161 385 aa3.56□□□□□ -1.84
RPB8YOR224C CMC1P36064 111 aa3.56□□□□□ -1.84
RPB8YOR224C MSO1P53604 210 aaKnown RBP3.56□□□□□ -1.84
RPB8YOR224C CAF40P53829 373 aa3.56□□□□□ -1.84
RPB8YOR224C MED1Q12321 566 aa3.56□□□□□ -1.84
RPB8YOR224C MRP7P12687 371 aa3.55□□□□□ -1.84
RPB8YOR224C MUM2P38236 366 aa3.55□□□□□ -1.84
RPB8YOR224C VID24P38263 362 aa3.55□□□□□ -1.84
RPB8YOR224C SDS24P38314 527 aa3.55□□□□□ -1.84
RPB8YOR224C TIF5P38431 405 aaKnown RBP3.55□□□□□ -1.84
RPB8YOR224C NDT80P38830 627 aa3.55□□□□□ -1.84
RPB8YOR224C FAU1P40099 211 aa3.55□□□□□ -1.84
RPB8YOR224C YPI1P43587 155 aa3.55□□□□□ -1.84
RPB8YOR224C AVT4P50944 713 aa3.55□□□□□ -1.84
RPB8YOR224C YGL108CP53139 140 aa3.55□□□□□ -1.84
RPB8YOR224C SUB1P54000 292 aaKnown RBP3.55□□□□□ -1.84
RPB8YOR224C KRE5P22023 1365 aa3.54□□□□□ -1.84
RPB8YOR224C YCR100CP25606 316 aa3.54□□□□□ -1.84
RPB8YOR224C RAD14P28519 371 aa3.54□□□□□ -1.84
RPB8YOR224C GPI10P30777 616 aa3.54□□□□□ -1.84
RPB8YOR224C CRM1P30822 1084 aaKnown RBP3.54□□□□□ -1.84
RPB8YOR224C REC114P32841 428 aa3.54□□□□□ -1.84
RPB8YOR224C NAT2P37293 288 aa3.54□□□□□ -1.84
RPB8YOR224C HXT14P42833 540 aa3.54□□□□□ -1.84
RPB8YOR224C POP6P53218 158 aa3.54□□□□□ -1.84
RPB8YOR224C GOR1P53839 350 aa3.54□□□□□ -1.84
RPB8YOR224C MRD1Q06106 887 aaKnown RBP3.54□□□□□ -1.84
RPB8YOR224C YPL199CQ08954 240 aa3.54□□□□□ -1.84
RPB8YOR224C KEL3Q08979 651 aaPredicted RBP3.54□□□□□ -1.84
RPB8YOR224C PMR1P13586 950 aa3.53□□□□□ -1.84
RPB8YOR224C GLC7P32598 312 aaKnown RBP3.53□□□□□ -1.84
RPB8YOR224C YBL059WP34224 193 aa3.53□□□□□ -1.84
RPB8YOR224C YGR149WP48236 432 aa3.53□□□□□ -1.84
RPB8YOR224C YGL242CP53066 181 aa3.53□□□□□ -1.84
RPB8YOR224C RMD9P53140 646 aaKnown RBP3.53□□□□□ -1.84
RPB8YOR224C OGG1P53397 376 aaPredicted RBP3.53□□□□□ -1.84
RPB8YOR224C IMH1Q06704 911 aaKnown RBP3.53□□□□□ -1.84
RPB8YOR224C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
RPB8YOR224C TLG2Q08144 397 aa3.53□□□□□ -1.84
RPB8YOR224C MUM3Q08750 479 aa3.53□□□□□ -1.84
RPB8YOR224C CFT1Q06632 1357 aaKnown RBP3.52□□□□□ -1.85
RPB8YOR224C RAD9P14737 1309 aa3.52□□□□□ -1.85
RPB8YOR224C TOP1P04786 769 aa3.52□□□□□ -1.85
RPB8YOR224C MET17P06106 444 aa3.52□□□□□ -1.85
RPB8YOR224C HIP1P06775 603 aa3.52□□□□□ -1.85
RPB8YOR224C RHO2P06781 192 aa3.52□□□□□ -1.85
RPB8YOR224C SAM1P10659 382 aaKnown RBP3.52□□□□□ -1.85
RPB8YOR224C REV1P12689 985 aa3.52□□□□□ -1.85
RPB8YOR224C SAM2P19358 384 aaKnown RBP3.52□□□□□ -1.85
RPB8YOR224C SPB1P25582 841 aaPredicted RBP3.52□□□□□ -1.85
RPB8YOR224C KEL1P38853 1164 aaKnown RBP3.52□□□□□ -1.85
RPB8YOR224C YIL067CP40514 678 aa3.52□□□□□ -1.85
RPB8YOR224C SPG5P42933 373 aa3.52□□□□□ -1.85
RPB8YOR224C WWM1P43582 211 aaKnown RBP3.52□□□□□ -1.85
RPB8YOR224C DSL1P53847 754 aa3.52□□□□□ -1.85
RPB8YOR224C PNG1Q02890 363 aa3.52□□□□□ -1.85
RPB8YOR224C SOV1Q04748 898 aa3.52□□□□□ -1.85
RPB8YOR224C HEL2Q05580 639 aaKnown RBP3.52□□□□□ -1.85
RPB8YOR224C YOR387CQ08910 206 aa3.52□□□□□ -1.85
RPB8YOR224C RRI2Q12348 645 aa3.52□□□□□ -1.85
RPB8YOR224C BCK1Q01389 1478 aa3.52□□□□□ -1.85
RPB8YOR224C RPL3P14126 387 aaKnown RBP3.51□□□□□ -1.85
RPB8YOR224C PAD1P33751 242 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
RPB8YOR224C THI2P38141 450 aa3.51□□□□□ -1.85
RPB8YOR224C OTU2P38747 307 aaKnown RBP3.51□□□□□ -1.85
RPB8YOR224C NDE1P40215 560 aa3.51□□□□□ -1.85
RPB8YOR224C PCP1P53259 346 aa3.51□□□□□ -1.85
RPB8YOR224C MRPL19P53875 158 aa3.51□□□□□ -1.85
RPB8YOR224C NCS2P53923 493 aaPredicted RBP3.51□□□□□ -1.85
RPB8YOR224C TSR2Q06672 205 aaKnown RBP3.51□□□□□ -1.85
RPB8YOR224C INH1P01097 85 aa3.5□□□□□ -1.85
RPB8YOR224C HHF1P02309 103 aaKnown RBP3.5□□□□□ -1.85
RPB8YOR224C HEM15P16622 393 aa3.5□□□□□ -1.85
RPB8YOR224C ATP10P18496 279 aa3.5□□□□□ -1.85
RPB8YOR224C PPH22P23595 377 aa3.5□□□□□ -1.85
RPB8YOR224C SWH1P35845 1188 aa3.5□□□□□ -1.85
RPB8YOR224C SLG1P54867 378 aa3.5□□□□□ -1.85
RPB8YOR224C ODC1Q03028 310 aa3.5□□□□□ -1.85
RPB8YOR224C SMA2Q04658 369 aa3.5□□□□□ -1.85
RPB8YOR224C RRN11Q04712 507 aa3.5□□□□□ -1.85
RPB8YOR224C PBA1Q05778 276 aa3.5□□□□□ -1.85
RPB8YOR224C THP3Q12049 470 aaKnown RBP3.5□□□□□ -1.85
RPB8YOR224C YER078W-AQ3E7A2 54 aa3.5□□□□□ -1.85
RPB8YOR224C TY1B-NL2Q99337 1749 aaKnown RBP3.5□□□□□ -1.85
RPB8YOR224C CHS1P08004 1131 aa3.49□□□□□ -1.85
RPB8YOR224C SPS4P09937 338 aa3.49□□□□□ -1.85
RPB8YOR224C YCR041WP37265 110 aa3.49□□□□□ -1.85
RPB8YOR224C UTP9P38882 575 aaKnown RBP3.49□□□□□ -1.85
RPB8YOR224C MET18P40469 1032 aa3.49□□□□□ -1.85
RPB8YOR224C GCD10P41814 478 aa3.49□□□□□ -1.85
RPB8YOR224C MNP1P53163 194 aaPredicted RBP3.49□□□□□ -1.85
RPB8YOR224C YIF1P53845 314 aaKnown RBP3.49□□□□□ -1.85
RPB8YOR224C GIR2Q03768 265 aaPredicted RBP3.49□□□□□ -1.85
RPB8YOR224C YDR387CQ04162 555 aa3.49□□□□□ -1.85
RPB8YOR224C ESA1Q08649 445 aa3.49□□□□□ -1.85
RPB8YOR224C YLR108CQ12259 485 aa3.49□□□□□ -1.85
RPB8YOR224C USO1P25386 1790 aa3.48□□□□□ -1.85
RPB8YOR224C SPT15P13393 240 aaKnown RBP3.48□□□□□ -1.85
RPB8YOR224C CKA1P15790 372 aa3.48□□□□□ -1.85
RPB8YOR224C CPR4P25334 318 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms