RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W REC114P32841 428 aa3.69□□□□□ -1.82
SSU72YNL222W NIP100P33420 868 aa3.69□□□□□ -1.82
SSU72YNL222W RIB5P38145 238 aa3.69□□□□□ -1.82
SSU72YNL222W RRT2P38332 387 aa3.69□□□□□ -1.82
SSU72YNL222W CCT2P39076 527 aaKnown RBP3.69□□□□□ -1.82
SSU72YNL222W MST28P39552 234 aa3.69□□□□□ -1.82
SSU72YNL222W PRM5P40476 318 aa3.69□□□□□ -1.82
SSU72YNL222W TFG2P41896 400 aaPredicted RBP3.69□□□□□ -1.82
SSU72YNL222W DSL1P53847 754 aa3.69□□□□□ -1.82
SSU72YNL222W YDR387CQ04162 555 aa3.69□□□□□ -1.82
SSU72YNL222W BSC6Q08280 497 aa3.69□□□□□ -1.82
SSU72YNL222W YPR022CQ12139 1133 aa3.69□□□□□ -1.82
SSU72YNL222W RBD2Q12270 262 aa3.69□□□□□ -1.82
SSU72YNL222W SUP35P05453 685 aaKnown RBP3.68□□□□□ -1.82
SSU72YNL222W PET123P17558 318 aa3.68□□□□□ -1.82
SSU72YNL222W PPH22P23595 377 aa3.68□□□□□ -1.82
SSU72YNL222W TIP1P27654 210 aaPredicted RBP3.68□□□□□ -1.82
SSU72YNL222W MTC6P38849 526 aa3.68□□□□□ -1.82
SSU72YNL222W ARF3P40994 183 aaRIP-Chip data3.68□□□□□ -1.82not detected
SSU72YNL222W RRI2Q12348 645 aa3.68□□□□□ -1.82
SSU72YNL222W RAD61Q99359 647 aa3.68□□□□□ -1.82
SSU72YNL222W SPS4P09937 338 aa3.67□□□□□ -1.82
SSU72YNL222W SPS22P25380 463 aa3.67□□□□□ -1.82
SSU72YNL222W APE2P32454 952 aaKnown RBP3.67□□□□□ -1.82
SSU72YNL222W ECM25P32525 599 aa3.67□□□□□ -1.82
SSU72YNL222W GYP6P32806 458 aa3.67□□□□□ -1.82
SSU72YNL222W RQC1Q05468 723 aaKnown RBP3.67□□□□□ -1.82
SSU72YNL222W HRI1Q05905 244 aaKnown RBP3.67□□□□□ -1.82
SSU72YNL222W PKH2Q12236 1081 aaKnown RBP3.67□□□□□ -1.82
SSU72YNL222W MET17P06106 444 aa3.66□□□□□ -1.82
SSU72YNL222W RPL3P14126 387 aaKnown RBP3.66□□□□□ -1.82
SSU72YNL222W RPI1P23250 407 aaKnown RBP3.66□□□□□ -1.82
SSU72YNL222W ITR1P30605 584 aa3.66□□□□□ -1.82
SSU72YNL222W PRP21P32524 280 aaPredicted RBP3.66□□□□□ -1.82
SSU72YNL222W SPR1P32603 445 aa3.66□□□□□ -1.82
SSU72YNL222W RPS0AP32905 252 aaKnown RBP3.66□□□□□ -1.82
SSU72YNL222W VTC2P43585 828 aa3.66□□□□□ -1.82
SSU72YNL222W SSN8P47821 323 aa3.66□□□□□ -1.82
SSU72YNL222W HXT11P54862 567 aa3.66□□□□□ -1.82
SSU72YNL222W VPS72Q03388 795 aa3.66□□□□□ -1.82
SSU72YNL222W HSP31Q04432 237 aa3.66□□□□□ -1.82
SSU72YNL222W TIM18Q08749 192 aa3.66□□□□□ -1.82
SSU72YNL222W GRX6Q12438 231 aa3.66□□□□□ -1.82
SSU72YNL222W DAL2P25335 343 aa3.65□□□□□ -1.83
SSU72YNL222W RVS161P25343 265 aaKnown RBP3.65□□□□□ -1.83
SSU72YNL222W HXT1P32465 570 aa3.65□□□□□ -1.83
SSU72YNL222W HXT3P32466 567 aaKnown RBP3.65□□□□□ -1.83
SSU72YNL222W PAN6P40459 309 aa3.65□□□□□ -1.83
SSU72YNL222W YGL039WP53183 348 aaKnown RBP3.65□□□□□ -1.83
SSU72YNL222W YIF1P53845 314 aaKnown RBP3.65□□□□□ -1.83
SSU72YNL222W YLR152CP54072 576 aa3.65□□□□□ -1.83
SSU72YNL222W PPM1Q04081 328 aa3.65□□□□□ -1.83
SSU72YNL222W MRP7P12687 371 aa3.64□□□□□ -1.83
SSU72YNL222W SLY1P22213 666 aa3.64□□□□□ -1.83
SSU72YNL222W YBR137WP38276 179 aa3.64□□□□□ -1.83
SSU72YNL222W MSG5P38590 489 aa3.64□□□□□ -1.83
SSU72YNL222W SMF1P38925 575 aa3.64□□□□□ -1.83
SSU72YNL222W ECM27P47144 725 aa3.64□□□□□ -1.83
SSU72YNL222W FRE4P53746 719 aa3.64□□□□□ -1.83
SSU72YNL222W HER2Q03557 464 aa3.64□□□□□ -1.83
SSU72YNL222W BUD21Q08492 214 aaPredicted RBP3.64□□□□□ -1.83
SSU72YNL222W TRP1P00912 224 aa3.63□□□□□ -1.83
SSU72YNL222W RPS8AP0CX39 200 aaKnown RBP3.63□□□□□ -1.83
SSU72YNL222W RPS8BP0CX40 200 aaKnown RBP3.63□□□□□ -1.83
SSU72YNL222W IRC6P43615 237 aa3.63□□□□□ -1.83
SSU72YNL222W GIR2Q03768 265 aaPredicted RBP3.63□□□□□ -1.83
SSU72YNL222W SYF1Q04048 859 aaPredicted RBP3.63□□□□□ -1.83
SSU72YNL222W SIL1Q08199 421 aa3.63□□□□□ -1.83
SSU72YNL222W QCR6P00127 147 aa3.62□□□□□ -1.83
SSU72YNL222W HIS4P00815 799 aaKnown RBP3.62□□□□□ -1.83
SSU72YNL222W HSP82P02829 709 aaKnown RBP3.62□□□□□ -1.83
SSU72YNL222W GPH1P06738 902 aaKnown RBP3.62□□□□□ -1.83
SSU72YNL222W RIP1P08067 215 aa3.62□□□□□ -1.83
SSU72YNL222W RNA1P11745 407 aaKnown RBP3.62□□□□□ -1.83
SSU72YNL222W CKA1P15790 372 aa3.62□□□□□ -1.83
SSU72YNL222W ROX1P25042 368 aa3.62□□□□□ -1.83
SSU72YNL222W VHC1P38329 1120 aa3.62□□□□□ -1.83
SSU72YNL222W UTP9P38882 575 aaKnown RBP3.62□□□□□ -1.83
SSU72YNL222W SAS2P40963 338 aa3.62□□□□□ -1.83
SSU72YNL222W TLG1Q03322 224 aa3.62□□□□□ -1.83
SSU72YNL222W SNX3Q08826 162 aaKnown RBP3.62□□□□□ -1.83
SSU72YNL222W PLP2Q12017 286 aa3.62□□□□□ -1.83
SSU72YNL222W SOD1P00445 154 aaKnown RBP3.61□□□□□ -1.83
SSU72YNL222W SEC63P14906 663 aa3.61□□□□□ -1.83
SSU72YNL222W MNS1P32906 549 aa3.61□□□□□ -1.83
SSU72YNL222W OTU2P38747 307 aaKnown RBP3.61□□□□□ -1.83
SSU72YNL222W LYS1P38998 373 aaRIP-Chip data3.61□□□□□ -1.83not detected
SSU72YNL222W YNR048WP53740 393 aa3.61□□□□□ -1.83
SSU72YNL222W YMR181CQ03231 154 aa3.61□□□□□ -1.83
SSU72YNL222W SPT7P35177 1332 aa3.61□□□□□ -1.83
SSU72YNL222W TEF1P02994 458 aaKnown RBP3.6□□□□□ -1.83
SSU72YNL222W NFT1P0CE68 1218 aa3.6□□□□□ -1.83
SSU72YNL222W YHR054CP38780 354 aa3.6□□□□□ -1.83
SSU72YNL222W ESL1P40456 1118 aa3.6□□□□□ -1.83
SSU72YNL222W MNP1P53163 194 aaPredicted RBP3.6□□□□□ -1.83
SSU72YNL222W MTM1P53320 366 aa3.6□□□□□ -1.83
SSU72YNL222W CWC25P53854 179 aaKnown RBP3.6□□□□□ -1.83
SSU72YNL222W RPA49Q01080 415 aaPredicted RBP3.6□□□□□ -1.83
SSU72YNL222W ARG4P04076 463 aaPredicted RBP3.59□□□□□ -1.83
SSU72YNL222W DAL5P15365 543 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms