RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	SHE10	P53075	577 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	PKP2	P53170	491 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	CUL3	P53202	744 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	JJJ1	P53863	590 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	YNL146W	P53906	100 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	RPA49	Q01080	415 aa	Predicted RBP	3.56	□□□□□ -1.84
TPM1	YNL079C	GYL1	Q04322	720 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	YMR034C	Q05131	434 aa	Predicted RBP	3.56	□□□□□ -1.84
TPM1	YNL079C	SRL1	Q08673	210 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	APL5	Q08951	932 aa	Known RBP	3.56	□□□□□ -1.84
TPM1	YNL079C	RCN2	Q12044	265 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	TY3A-G	Q12173	290 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	RIO1	Q12196	484 aa	Known RBP	3.56	□□□□□ -1.84
TPM1	YNL079C	TY3A-I	Q99219	290 aa		3.56	□□□□□ -1.84
TPM1	YNL079C	YLR462W	O13556	202 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	RAD1	P06777	1100 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	BUD5	P25300	642 aa	Predicted RBP	3.55	□□□□□ -1.84
TPM1	YNL079C	DAL2	P25335	343 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	YCR043C	P25361	127 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	YUR1	P26725	428 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	CMK1	P27466	446 aa	Known RBP	3.55	□□□□□ -1.84
TPM1	YNL079C	DPH2	P32461	534 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	SWI3	P32591	825 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	UBC6	P33296	250 aa	Predicted RBP	3.55	□□□□□ -1.84
TPM1	YNL079C	YBR144C	P34215	104 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	CSG2	P35206	410 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	LAS1	P36146	502 aa	Predicted RBP	3.55	□□□□□ -1.84
TPM1	YNL079C	MRX3	P38172	270 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	YBR225W	P38321	900 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	ARC40	P38328	384 aa	Known RBP	3.55	□□□□□ -1.84
TPM1	YNL079C	RRT2	P38332	387 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	HIS2	P38635	335 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	YHL049C	P38722	271 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	YEL075C	P39972	122 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	LCP5	P40079	357 aa	Predicted RBP	3.55	□□□□□ -1.84
TPM1	YNL079C	YER189W	P40104	122 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	IAH1	P41734	238 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	YFL064C	P43540	174 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	PTR3	P43606	678 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	CPR7	P47103	393 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	BRO1	P48582	844 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	PYK2	P52489	506 aa	Known RBP	3.55	□□□□□ -1.84
TPM1	YNL079C	YGR127W	P53275	312 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	ARE2	P53629	642 aa	Known RBP	3.55	□□□□□ -1.84
TPM1	YNL079C	RSM23	Q01163	450 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	NUP100	Q02629	959 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	PPM1	Q04081	328 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	YMR254C	Q04838	102 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	ECM30	Q06673	1274 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	FMP40	Q08968	688 aa	Predicted RBP	3.55	□□□□□ -1.84
TPM1	YNL079C	RUD3	Q12234	484 aa	Known RBP	3.55	□□□□□ -1.84
TPM1	YNL079C	GIS3	Q12418	502 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	YBL111C	Q3E7Y5	667 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	YPT6	Q99260	215 aa		3.55	□□□□□ -1.84
TPM1	YNL079C	QCR6	P00127	147 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	RPS3	P05750	240 aa	Known RBP	3.54	□□□□□ -1.84
TPM1	YNL079C	NAT1	P12945	854 aa	Known RBP	3.54	□□□□□ -1.84
TPM1	YNL079C	CDC42	P19073	191 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	BOS1	P25385	244 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	GID7	P25569	745 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	IMG1	P25626	169 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	DBF4	P32325	704 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	YBL055C	P34220	418 aa	Predicted RBP	3.54	□□□□□ -1.84
TPM1	YNL079C	MTR2	P34232	184 aa	Known RBP	3.54	□□□□□ -1.84
TPM1	YNL079C	YKL100C	P34248	587 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	VID24	P38263	362 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	SPP381	P38282	291 aa	Predicted RBP	3.54	□□□□□ -1.84
TPM1	YNL079C	ICS2	P38284	255 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	MMS21	P38632	267 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	AFG3	P39925	761 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	RTS2	P40962	232 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
TPM1	YNL079C	PHO86	P46956	311 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	YJR079W	P47126	109 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	DRN1	P53255	507 aa	Known RBP	3.54	□□□□□ -1.84
TPM1	YNL079C	YGR111W	P53265	400 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	BET4	Q00618	327 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	MRS2	Q01926	470 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	MSC1	Q03104	513 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	TDA9	Q04545	1251 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	YDR222W	Q04925	415 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	STE23	Q06010	1027 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	SFH1	Q06168	426 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	ECM7	Q06200	448 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	SDH5	Q08230	162 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	HIF1	Q12373	385 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	AI5_BETA	Q9ZZX0	354 aa		3.54	□□□□□ -1.84
TPM1	YNL079C	GCN4	P03069	281 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	CBS1	P14066	229 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	MGR1	P25573	417 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	RGT1	P32862	1170 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	TIF3	P34167	436 aa	Known RBP	3.53	□□□□□ -1.84
TPM1	YNL079C	APE3	P37302	537 aa	Known RBP	3.53	□□□□□ -1.84
TPM1	YNL079C	ROT2	P38138	954 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	MMS4	P38257	691 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	END3	P39013	349 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	TES1	P41903	349 aa	Known RBP	3.53	□□□□□ -1.84
TPM1	YNL079C	YNL320W	P42840	284 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	SCS3	P53012	380 aa		3.53	□□□□□ -1.84
TPM1	YNL079C	HOS2	P53096	452 aa	Predicted RBP	3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms