RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C TIP1P27654 210 aaPredicted RBP2.5□□□□□ -2.01
AFB1YLR040C ECM25P32525 599 aa2.5□□□□□ -2.01
AFB1YLR040C SDH3P33421 198 aa2.5□□□□□ -2.01
AFB1YLR040C STB6P36085 766 aa2.5□□□□□ -2.01
AFB1YLR040C PIM1P36775 1133 aa2.5□□□□□ -2.01
AFB1YLR040C RIB5P38145 238 aa2.5□□□□□ -2.01
AFB1YLR040C YBR137WP38276 179 aa2.5□□□□□ -2.01
AFB1YLR040C MST28P39552 234 aa2.5□□□□□ -2.01
AFB1YLR040C SAS2P40963 338 aa2.5□□□□□ -2.01
AFB1YLR040C WWM1P43582 211 aaKnown RBP2.5□□□□□ -2.01
AFB1YLR040C MRP51Q02950 344 aa2.5□□□□□ -2.01
AFB1YLR040C PAL1Q05518 499 aaKnown RBP2.5□□□□□ -2.01
AFB1YLR040C SIL1Q08199 421 aa2.5□□□□□ -2.01
AFB1YLR040C MUM3Q08750 479 aa2.5□□□□□ -2.01
AFB1YLR040C RAD61Q99359 647 aa2.5□□□□□ -2.01
AFB1YLR040C YLR278CQ05854 1341 aa2.49□□□□□ -2.01
AFB1YLR040C RIP1P08067 215 aa2.49□□□□□ -2.01
AFB1YLR040C SPS4P09937 338 aa2.49□□□□□ -2.01
AFB1YLR040C RPS8AP0CX39 200 aaKnown RBP2.49□□□□□ -2.01
AFB1YLR040C RPS8BP0CX40 200 aaKnown RBP2.49□□□□□ -2.01
AFB1YLR040C ISY1P21374 235 aaPredicted RBP2.49□□□□□ -2.01
AFB1YLR040C CDC60P26637 1090 aaKnown RBP2.49□□□□□ -2.01
AFB1YLR040C PTH1P38876 190 aaKnown RBP2.49□□□□□ -2.01
AFB1YLR040C FAA2P39518 744 aa2.49□□□□□ -2.01
AFB1YLR040C PRM5P40476 318 aa2.49□□□□□ -2.01
AFB1YLR040C LAM5P43560 674 aa2.49□□□□□ -2.01
AFB1YLR040C NCA3P46955 337 aa2.49□□□□□ -2.01
AFB1YLR040C DSL1P53847 754 aa2.49□□□□□ -2.01
AFB1YLR040C RPA49Q01080 415 aaPredicted RBP2.49□□□□□ -2.01
AFB1YLR040C SYF1Q04048 859 aaPredicted RBP2.49□□□□□ -2.01
AFB1YLR040C TAF11Q04226 346 aa2.49□□□□□ -2.01
AFB1YLR040C TIM18Q08749 192 aa2.49□□□□□ -2.01
AFB1YLR040C PKH2Q12236 1081 aaKnown RBP2.49□□□□□ -2.01
AFB1YLR040C SLY1P22213 666 aa2.48□□□□□ -2.01
AFB1YLR040C ARO2P28777 376 aaKnown RBP2.48□□□□□ -2.01
AFB1YLR040C APE2P32454 952 aaKnown RBP2.48□□□□□ -2.01
AFB1YLR040C REC114P32841 428 aa2.48□□□□□ -2.01
AFB1YLR040C SAS3P34218 831 aa2.48□□□□□ -2.01
AFB1YLR040C VHC1P38329 1120 aa2.48□□□□□ -2.01
AFB1YLR040C RFC3P38629 340 aa2.48□□□□□ -2.01
AFB1YLR040C DED81P38707 554 aaKnown RBP2.48□□□□□ -2.01
AFB1YLR040C UTP9P38882 575 aaKnown RBP2.48□□□□□ -2.01
AFB1YLR040C VTC2P43585 828 aa2.48□□□□□ -2.01
AFB1YLR040C TIS11P47977 285 aa2.48□□□□□ -2.01
AFB1YLR040C MTM1P53320 366 aa2.48□□□□□ -2.01
AFB1YLR040C FRE4P53746 719 aa2.48□□□□□ -2.01
AFB1YLR040C GIR2Q03768 265 aaPredicted RBP2.48□□□□□ -2.01
AFB1YLR040C MHR1Q06630 226 aa2.48□□□□□ -2.01
AFB1YLR040C ORT1Q12375 292 aa2.48□□□□□ -2.01
AFB1YLR040C TOP1P04786 769 aa2.47□□□□□ -2.01
AFB1YLR040C GPH1P06738 902 aaKnown RBP2.47□□□□□ -2.01
AFB1YLR040C RPI1P23250 407 aaKnown RBP2.47□□□□□ -2.01
AFB1YLR040C SPS22P25380 463 aa2.47□□□□□ -2.01
AFB1YLR040C ERG3P32353 365 aa2.47□□□□□ -2.01
AFB1YLR040C HXT1P32465 570 aa2.47□□□□□ -2.01
AFB1YLR040C RML2P32611 393 aa2.47□□□□□ -2.01
AFB1YLR040C LYS1P38998 373 aaRIP-Chip data2.47□□□□□ -2.01not detected
AFB1YLR040C ECM27P47144 725 aa2.47□□□□□ -2.01
AFB1YLR040C SDT1P53078 280 aa2.47□□□□□ -2.01
AFB1YLR040C YLR152CP54072 576 aa2.47□□□□□ -2.01
AFB1YLR040C PPM1Q04081 328 aa2.47□□□□□ -2.01
AFB1YLR040C HRI1Q05905 244 aaKnown RBP2.47□□□□□ -2.01
AFB1YLR040C MDM30Q05930 598 aa2.47□□□□□ -2.01
AFB1YLR040C VTA1Q06263 330 aa2.47□□□□□ -2.01
AFB1YLR040C RTN2Q12443 393 aa2.47□□□□□ -2.01
AFB1YLR040C PGA3Q12746 312 aaKnown RBP2.47□□□□□ -2.01
AFB1YLR040C RRT2P38332 387 aa2.46□□□□□ -2.02
AFB1YLR040C MSG5P38590 489 aa2.46□□□□□ -2.02
AFB1YLR040C OTU2P38747 307 aaKnown RBP2.46□□□□□ -2.02
AFB1YLR040C MTC6P38849 526 aa2.46□□□□□ -2.02
AFB1YLR040C PAN6P40459 309 aa2.46□□□□□ -2.02
AFB1YLR040C DLD2P46681 530 aaKnown RBP2.46□□□□□ -2.02
AFB1YLR040C SSN8P47821 323 aa2.46□□□□□ -2.02
AFB1YLR040C YNR048WP53740 393 aa2.46□□□□□ -2.02
AFB1YLR040C TSR2Q06672 205 aaKnown RBP2.46□□□□□ -2.02
AFB1YLR040C RBD2Q12270 262 aa2.46□□□□□ -2.02
AFB1YLR040C TEF1P02994 458 aaKnown RBP2.45□□□□□ -2.02
AFB1YLR040C SUP35P05453 685 aaKnown RBP2.45□□□□□ -2.02
AFB1YLR040C ILV5P06168 395 aaKnown RBP2.45□□□□□ -2.02
AFB1YLR040C NFT1P0CE68 1218 aa2.45□□□□□ -2.02
AFB1YLR040C RED1P14291 827 aa2.45□□□□□ -2.02
AFB1YLR040C PET123P17558 318 aa2.45□□□□□ -2.02
AFB1YLR040C GEX1P25596 615 aa2.45□□□□□ -2.02
AFB1YLR040C SIN4P32259 974 aa2.45□□□□□ -2.02
AFB1YLR040C MNS1P32906 549 aa2.45□□□□□ -2.02
AFB1YLR040C SWE1P32944 819 aa2.45□□□□□ -2.02
AFB1YLR040C HCS1P34243 683 aa2.45□□□□□ -2.02
AFB1YLR040C RPS0BP46654 252 aaKnown RBP2.45□□□□□ -2.02
AFB1YLR040C YJR011CP47086 261 aaPredicted RBP2.45□□□□□ -2.02
AFB1YLR040C MNP1P53163 194 aaPredicted RBP2.45□□□□□ -2.02
AFB1YLR040C YMR181CQ03231 154 aa2.45□□□□□ -2.02
AFB1YLR040C COG4Q06096 861 aa2.45□□□□□ -2.02
AFB1YLR040C BSC6Q08280 497 aa2.45□□□□□ -2.02
AFB1YLR040C SNX3Q08826 162 aaKnown RBP2.45□□□□□ -2.02
AFB1YLR040C HIS4P00815 799 aaKnown RBP2.44□□□□□ -2.02
AFB1YLR040C CYC3P06182 269 aa2.44□□□□□ -2.02
AFB1YLR040C DAL2P25335 343 aa2.44□□□□□ -2.02
AFB1YLR040C SNT1P25357 1226 aa2.44□□□□□ -2.02
AFB1YLR040C SPR1P32603 445 aa2.44□□□□□ -2.02
AFB1YLR040C YHR054CP38780 354 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms